KEGG   Variovorax paradoxus EPS: Varpa_0335
Entry
Varpa_0335        CDS       T01392                                 
Name
(GenBank) Methylcrotonoyl-CoA carboxylase
  KO
K13778  geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00907  Pinene, camphor and geraniol degradation
vpe01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00907 Pinene, camphor and geraniol degradation
    Varpa_0335
Enzymes [BR:vpe01000]
 6. Ligases
  6.4  Forming carbon-carbon bonds
   6.4.1  Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
    6.4.1.5  geranoyl-CoA carboxylase
     Varpa_0335
SSDB
Motif
Pfam: Carboxyl_trans MdcE
Other DBs
NCBI-ProteinID: ADU34557
UniProt: E6V2C6
LinkDB
Position
354527..356137
AA seq 536 aa
MPVIESRLSSASDTFQANRTGMLALLDQVRAHEARAASASGASAERFAKRGQLLPRERIA
LLLDTGAPFLPLASLAGLGHDNPDLSKSVPGGGLISGIGQVAGVRCMVSASDSGIDAGAL
QPMGLDKQLRVQEIALENKLPYVQLVESAGANLMQYRVQDFVRGGSIFRNLARLSAAGLP
VVTVTHGSSTAGGAYQTGLSDYIVMVRDRTRAFLAGPPLLKAATGEIATEEELGGAVMHT
HISGLGDYLAEDDRDAIRIARSILGGIDWTRDEAPRAFTPPRYDAEDLLGIMPSDGRRPV
DMREVIARIADGSEFLEFSEHYGSATVCAHIRLEGHAVGIVTNNGPIDSDGATKATHFIQ
ACCQSRTPIVYLQNITGYMVGRAHEEAGIIKHGAKMIQAVTNATVPQITLYCGASYGAGN
YGMCGRGFAPRFCFSWPNARTAVMGGEQAAKTMAIVMEAGMARKGAVDTAKIDAMQQQIV
ERFDRQMSVFTTSAMLLDDGVIDPRDTRAVLAEVLSVCRDADARVPQAMQFSVARP
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgcccgtcatcgaatcccggctgtcatcggccagcgacaccttccaggccaaccgcacc
ggcatgctcgcgctgctggaccaggtgcgtgcgcacgaggcccgcgccgcgtctgcctcg
ggcgcctcggccgagcgctttgccaagcgcggccagctcttgccgcgcgaacgcatcgcg
ctgctgctggacaccggcgcgccctttcttccgctggcttctctcgcaggccttggtcat
gacaaccccgatctttcgaagagcgtgcccggcggcgggttgatctccggcatcggccag
gtcgcgggcgtgcgctgcatggtgagcgcctccgattcgggcatcgacgccggcgcgctg
caaccgatgggcctggacaagcagctgcgcgtgcaagagatcgcgctcgagaacaagctc
ccctacgtgcagctggtcgaaagcgccggcgccaatctcatgcagtaccgcgtccaggac
ttcgtgcgcggcggcagcatctttcgcaacctcgcgcggctctcggcggcggggctgccc
gtggtgacggtgacgcatggctcctcgaccgcgggcggcgcctaccagacgggtttgtcg
gactacatcgtgatggtgcgcgatcgcacccgggccttcctcgccggaccgccgctgctg
aaagccgccaccggcgaaatcgccaccgaagaagaactcggcggtgccgtgatgcacacc
cacatttcgggcctgggcgactacctcgccgaagacgaccgcgacgccatccgcatcgca
cgctcgatcctcggcggcatcgactggacccgcgacgaagcaccgcgcgccttcacgccg
ccgcgctacgacgccgaagacctgctgggcatcatgccgagcgacggacgccggccggtg
gacatgcgcgaggtcatcgcgcgcatcgccgacggctccgagttcctcgaattcagcgag
cactacggcagcgccaccgtctgcgcccacatccggctcgaaggccatgcggtgggcatc
gtcaccaacaacggcccgatcgattccgacggcgcgaccaaggccacgcacttcatccag
gcctgctgccagtcgcgcacgcccatcgtctacctgcagaacatcaccggctacatggtg
ggccgcgcgcacgaggaggccggcatcatcaagcacggcgccaagatgatccaggccgtg
accaacgccacggtgccgcagatcacgctgtactgcggcgcctcgtacggcgcgggcaac
tacggcatgtgcggccgaggcttcgctccgcgcttctgcttctcgtggccgaacgcgcgc
accgccgtgatgggcggcgagcaggccgccaagaccatggccatcgtcatggaggccggc
atggcgcgcaagggcgcggtcgacaccgcgaagatcgatgcgatgcagcagcagatcgtc
gagcgcttcgaccggcagatgagcgtgttcaccaccagcgcgatgctgctggacgatggc
gtgatcgatccgcgcgacacgcgcgcggtgctggccgaggtgctgtcggtgtgccgcgat
gccgatgcgcgcgtgccgcaggcgatgcagttctcggtggcgcggccatga

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