Variovorax paradoxus EPS: Varpa_0335
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Entry
Varpa_0335 CDS
T01392
Name
(GenBank) Methylcrotonoyl-CoA carboxylase
KO
K13778
geranyl-CoA carboxylase beta subunit [EC:
6.4.1.5
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00907
Pinene, camphor and geraniol degradation
vpe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Varpa_0335
Enzymes [BR:
vpe01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
Varpa_0335
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Motif
Pfam:
Carboxyl_trans
MdcE
Motif
Other DBs
NCBI-ProteinID:
ADU34557
UniProt:
E6V2C6
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Position
354527..356137
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AA seq
536 aa
AA seq
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MPVIESRLSSASDTFQANRTGMLALLDQVRAHEARAASASGASAERFAKRGQLLPRERIA
LLLDTGAPFLPLASLAGLGHDNPDLSKSVPGGGLISGIGQVAGVRCMVSASDSGIDAGAL
QPMGLDKQLRVQEIALENKLPYVQLVESAGANLMQYRVQDFVRGGSIFRNLARLSAAGLP
VVTVTHGSSTAGGAYQTGLSDYIVMVRDRTRAFLAGPPLLKAATGEIATEEELGGAVMHT
HISGLGDYLAEDDRDAIRIARSILGGIDWTRDEAPRAFTPPRYDAEDLLGIMPSDGRRPV
DMREVIARIADGSEFLEFSEHYGSATVCAHIRLEGHAVGIVTNNGPIDSDGATKATHFIQ
ACCQSRTPIVYLQNITGYMVGRAHEEAGIIKHGAKMIQAVTNATVPQITLYCGASYGAGN
YGMCGRGFAPRFCFSWPNARTAVMGGEQAAKTMAIVMEAGMARKGAVDTAKIDAMQQQIV
ERFDRQMSVFTTSAMLLDDGVIDPRDTRAVLAEVLSVCRDADARVPQAMQFSVARP
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcatcgaatcccggctgtcatcggccagcgacaccttccaggccaaccgcacc
ggcatgctcgcgctgctggaccaggtgcgtgcgcacgaggcccgcgccgcgtctgcctcg
ggcgcctcggccgagcgctttgccaagcgcggccagctcttgccgcgcgaacgcatcgcg
ctgctgctggacaccggcgcgccctttcttccgctggcttctctcgcaggccttggtcat
gacaaccccgatctttcgaagagcgtgcccggcggcgggttgatctccggcatcggccag
gtcgcgggcgtgcgctgcatggtgagcgcctccgattcgggcatcgacgccggcgcgctg
caaccgatgggcctggacaagcagctgcgcgtgcaagagatcgcgctcgagaacaagctc
ccctacgtgcagctggtcgaaagcgccggcgccaatctcatgcagtaccgcgtccaggac
ttcgtgcgcggcggcagcatctttcgcaacctcgcgcggctctcggcggcggggctgccc
gtggtgacggtgacgcatggctcctcgaccgcgggcggcgcctaccagacgggtttgtcg
gactacatcgtgatggtgcgcgatcgcacccgggccttcctcgccggaccgccgctgctg
aaagccgccaccggcgaaatcgccaccgaagaagaactcggcggtgccgtgatgcacacc
cacatttcgggcctgggcgactacctcgccgaagacgaccgcgacgccatccgcatcgca
cgctcgatcctcggcggcatcgactggacccgcgacgaagcaccgcgcgccttcacgccg
ccgcgctacgacgccgaagacctgctgggcatcatgccgagcgacggacgccggccggtg
gacatgcgcgaggtcatcgcgcgcatcgccgacggctccgagttcctcgaattcagcgag
cactacggcagcgccaccgtctgcgcccacatccggctcgaaggccatgcggtgggcatc
gtcaccaacaacggcccgatcgattccgacggcgcgaccaaggccacgcacttcatccag
gcctgctgccagtcgcgcacgcccatcgtctacctgcagaacatcaccggctacatggtg
ggccgcgcgcacgaggaggccggcatcatcaagcacggcgccaagatgatccaggccgtg
accaacgccacggtgccgcagatcacgctgtactgcggcgcctcgtacggcgcgggcaac
tacggcatgtgcggccgaggcttcgctccgcgcttctgcttctcgtggccgaacgcgcgc
accgccgtgatgggcggcgagcaggccgccaagaccatggccatcgtcatggaggccggc
atggcgcgcaagggcgcggtcgacaccgcgaagatcgatgcgatgcagcagcagatcgtc
gagcgcttcgaccggcagatgagcgtgttcaccaccagcgcgatgctgctggacgatggc
gtgatcgatccgcgcgacacgcgcgcggtgctggccgaggtgctgtcggtgtgccgcgat
gccgatgcgcgcgtgccgcaggcgatgcagttctcggtggcgcggccatga
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