Variovorax paradoxus EPS: Varpa_0336
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Entry
Varpa_0336 CDS
T01392
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding protein
KO
K13777
geranyl-CoA carboxylase alpha subunit [EC:
6.4.1.5
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00907
Pinene, camphor and geraniol degradation
vpe01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
Varpa_0336
Enzymes [BR:
vpe01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.5 geranoyl-CoA carboxylase
Varpa_0336
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GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
HlyD_3
LpxI_N
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
ADU34558
UniProt:
E6V2C7
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Position
356134..358086
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AA seq
650 aa
AA seq
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MKGFNKILIANRGEIAVRVMRTARTMGYRTVAVYSSADADAEHVRQADQAVWIGESLPAQ
SYLNIAAIIEAARASGAQAVHPGYGFLAENAGFAEACRNAGLVFIGPSPEAIRAMGDKAG
AKRLMRAAGVPCIPGYQGEDQSQSTLAAEAARIGWPVMIKATAGGGGRGMRLVPSAAAFA
DLLQSAQSEALNAFGNATVILERAVVAPRHIEIQVFADRHGNGIHLGERDCSVQRRHQKV
IEESPSPAVSAELRERMGATAVAAAKAIAYEGAGTLEFLLDADGQYWFMEMNTRLQVEHP
VTEAVTGLDLVELQLRVAAGEPLPLTQQDVQMNGHAIEVRLCAEDPQQGFMPQSGTLAAW
RPSPALRIEHALRDGAEVPAFYDSMIAKLVSHGRTRDEARQRLIAGLQDTVALGIATNQE
FLRRALSHPVFAEGAATTAFIAEHAEALLAPDAAMEGRAALLAALLLQLGERGWPSPLAH
TLPNALRFSLNGEVHAARVTPQGAGRFDVAVDATGPERIELLALPGDGVVRFSCGGVSEQ
AMSVRKSATHLWIHFSGQAFELENLTHVAVPRAGAAGGDGLLRASMNGRVIALLAAEGDT
VAAGQPLVTLEAMKMEHVHCAPRAGRVAALHVAVGAQVAARHVVAEIADA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgaaggggttcaacaagatcctcatcgccaaccgcggcgaaatcgcggtgcgtgtgatg
cgcaccgcacgcaccatgggctatcgcaccgtcgccgtgtattcgagcgccgacgccgat
gcggaacatgtgcggcaagccgaccaggccgtgtggatcggtgagtcgctgcccgcgcag
agctacctcaacatcgccgcgatcatcgaagccgcgcgtgcgagcggtgcacaagctgtg
catcccggctacggcttccttgcggagaacgccgggttcgcagaggcctgccgcaacgct
ggcctcgtcttcatcggcccctcgcccgaagccattcgcgcgatgggcgacaaggcgggc
gccaagcggctgatgcgggcggccggcgtgccgtgcattcccggctaccagggcgaagac
cagagccaatccacgctcgcagccgaagctgcccgcatcggctggcccgtgatgatcaaa
gcaaccgccggcggcggcgggcgcggcatgcggctggtgccatcggccgcggcctttgcc
gatctgctgcagagcgcgcagtccgaagcactcaacgccttcggcaatgcgaccgtgatc
ctggagcgcgccgtcgtcgcgccgcgccacatcgaaatccaggtgttcgccgaccgccac
ggcaatggcatccacctcggcgagcgcgactgctcggtgcagcgtaggcatcagaaggtg
atcgaggaatcgccgtcgccggcggtgtccgccgagttgcgcgaacgcatgggcgcgacc
gccgttgccgcggcaaaagccatcgcgtacgaaggcgctggcacgctcgagtttttgctc
gacgccgacggccaatactggttcatggagatgaacacgcggctgcaggtggagcatccc
gtgaccgaggcggtgacggggctcgacctcgtcgaactgcaactgcgcgtcgccgccgga
gagccattgccgctcactcagcaggacgtgcagatgaacggccacgcgatcgaagtgcgc
ctgtgcgccgaggacccgcagcagggcttcatgccgcagagcggcacgctcgctgcatgg
cggccgtcgccggctcttcgtatcgaacatgcgttgcgcgatggcgccgaagtgccggcg
ttctacgactcgatgatcgccaagctggtgtcgcacggacggacccgcgacgaagcgagg
cagcgtctcatcgcaggcctgcaggacactgtggcgctcggcatcgcgaccaaccaagag
tttctgcggcgcgcgctgtcgcaccccgtgtttgccgagggtgcggcgacgacggcgttc
atcgccgagcatgccgaggcgctgctcgcgcctgacgccgcaatggaaggccgcgccgcg
ttgctcgccgcactactgcttcaactcggcgaacgtggctggccttcaccgcttgcgcac
acgctgcctaacgcactgcgcttctcgctcaacggcgaggtgcatgcagcgcgtgtgacg
ccgcagggcgcaggtcgtttcgatgtcgcagtcgatgcaaccgggcctgagcgcatcgaa
ctgcttgcgctgcccggtgacggcgtcgtgcgcttctcatgcggcggtgtttccgagcag
gccatgtcggtgcgcaagtccgccacgcacctgtggattcatttcagcggccaggccttc
gaactcgagaatctcacgcatgtggcggtgcctcgcgccggtgctgctggcggcgacggc
ctgctgcgcgcctcgatgaacggccgcgtcatcgccctgctcgccgccgagggggacacg
gtcgctgccggccagcccctcgtcacgctcgaagcgatgaagatggaacacgtgcattgc
gcaccgcgcgccggccgcgtcgccgcgctgcatgtcgcggtgggcgcgcaggtggccgcg
cgccatgtggtggcggagattgccgacgcatga
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