KEGG   Variovorax paradoxus EPS: Varpa_0502
Entry
Varpa_0502        CDS       T01392                                 
Name
(GenBank) FHA domain containing protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Varpa_0502
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_0502
   02035 Bacterial motility proteins [BR:vpe02035]
    Varpa_0502
Enzymes [BR:vpe01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Varpa_0502
Secretion system [BR:vpe02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Varpa_0502
Bacterial motility proteins [BR:vpe02035]
 Pilus system
  Pilus assembly proteins
   Varpa_0502
SSDB
Motif
Pfam: T2SSE FHA Yop-YscD_cpl AAA_16 AAA_22 ABC_tran Zeta_toxin AAA_7 AAA_19 AAA_29 Mg_chelatase AAA_28 AAA_30 PIF1 nSTAND3 AAA_23 Sigma54_activat cobW
Other DBs
NCBI-ProteinID: ADU34724
UniProt: E6V4H8
LinkDB
Position
541388..543031
AA seq 547 aa
MHKVFVNSPQQVVREVPIDVAELQVGKDAGNHIVLSGWNVAKLHAQFVLHDEEVFVQDLG
SLFGTWVDGNRVTRFGPMKGGEEIIIGGHTLVVSLDVALKPAGADPQEAAEAAQYAEAAL
AIEDPLLQWRRSLHRTLLQQLDNRRIDTAQMKDEELRSNIRALIAEVIRDTRDMPPELDR
ALLSQQLLDEAIGLGPLEVLLKDESVTEVMVNRFDEIWIERAGRLERTNVAFTSNIAVLG
AIERIVTPLGRRIDESSPMVDARLKDGSRVNAIIPPLALRGPSVTIRKFPKNRMGHEGMI
RTGSITAQMVDFMRIAVEEKLNIIVSGGTGTGKTTLLNMVSNFIPPNERIVTIEDAAELS
LGQPNLVSLESRPANIEGKGAIAIRDLVRNSLRMRPDRIVVGECRGGEALDMLQAMNTGH
DGSLTTLHSNSPRDAMSRLEVLVTMAGMNIPVAAIREQIASAVDLIVQLTRFPCGSRKVT
QITEITGFADGMIQMQDVYAFRKTGVDDSFKTIGHFTAAGTVPEFFTRLQEHGLKLDLEY
LFGETTA
NT seq 1644 nt   +upstreamnt  +downstreamnt
atgcacaaggtcttcgtcaattccccgcagcaggtcgtgcgcgaggtcccgatcgatgtc
gcggaactccaggtcggcaaggacgccggcaaccacatcgtgctgtcgggctggaacgtc
gcgaagctgcacgcccagttcgtgctgcacgacgaggaagtgttcgtgcaggacctgggc
agcctcttcggcacctgggtcgatggcaaccgggtgacgcgcttcggcccgatgaagggc
ggcgaggaaatcatcatcggcggccacacgctggtggtgtcgctcgacgtggcgctcaag
cccgcgggcgccgatccgcaggaggcggccgaggcggcgcagtacgccgaagcggcgctc
gccatcgaggacccgctgctgcaatggcgccgctcgctgcaccgcacgctgctgcagcaa
ctggacaaccgccgcatcgacaccgcgcagatgaaggacgaggagctgcgctccaacatc
cgcgcgctgatcgccgaggtcatccgcgacacgcgcgacatgccgcccgaactcgaccgc
gcgttgctgagccagcaactgctggacgaagccatcggcctcggtccgctcgaagtgctg
ctgaaagacgagagcgtgaccgaagtgatggtcaaccgcttcgacgagatctggatcgag
cgcgcgggccggctggagcgcaccaacgttgccttcaccagcaacatcgcggtgctcggc
gccatcgagcgcatcgtgacgccgctgggccggcgtatcgacgagagttcgccgatggtg
gatgcgcgcctgaaggacggctcgcgcgtgaacgcgatcattccgccgctcgcgctgcgc
ggacccagcgtcacgatccggaaattcccgaagaaccgcatgggccacgaggggatgatc
cgcaccggctccatcaccgcgcagatggtggacttcatgcgcatcgcggtggaagagaag
ctcaacatcatcgtctcgggcggcacaggcaccggcaagacgacgctcttgaacatggtg
tcgaacttcattccgccgaacgagcgcatcgtgaccatcgaggatgccgccgagctctcg
ctgggccagcccaacctggtgtcgctcgaatcgcggcccgccaacatcgaaggcaagggc
gccatcgcgattcgcgacctggtgcgcaactcgctgcggatgcggcccgaccgcatcgtg
gtgggcgagtgccgcggcggcgaggcgctggacatgctgcaggccatgaacaccggccac
gacggctcgctcaccacgctgcacagcaactcgccgcgcgatgcgatgtcgcggctggaa
gtgctggtgacgatggcgggcatgaacatcccggtggcggcgatccgcgagcagatcgcc
tcggcggtcgatctgatcgtgcagctcacgcgctttccgtgcggcagccgcaaggtcacg
cagatcaccgagatcacgggctttgccgacggcatgatccagatgcaggacgtgtacgcc
ttccgcaaaaccggcgtggacgacagcttcaagaccatcggccacttcaccgccgcgggc
accgtgcccgagttcttcacgcgcctgcaggagcatggcctgaagctcgacctggaatac
cttttcggggagaccacggcatga

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