KEGG   Variovorax paradoxus EPS: Varpa_1101
Entry
Varpa_1101        CDS       T01392                                 
Name
(GenBank) delta-1-pyrroline-5-carboxylate dehydrogenase
  KO
K13821  RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe00250  Alanine, aspartate and glutamate metabolism
vpe00330  Arginine and proline metabolism
vpe01100  Metabolic pathways
vpe01110  Biosynthesis of secondary metabolites
Module
vpe_M00970  Proline degradation, proline => glutamate
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    Varpa_1101
   00330 Arginine and proline metabolism
    Varpa_1101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vpe03000]
    Varpa_1101
Enzymes [BR:vpe01000]
 1. Oxidoreductases
  1.2  Acting on the aldehyde or oxo group of donors
   1.2.1  With NAD+ or NADP+ as acceptor
    1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase
     Varpa_1101
  1.5  Acting on the CH-NH group of donors
   1.5.5  With a quinone or similar compound as acceptor
    1.5.5.2  proline dehydrogenase
     Varpa_1101
Transcription factors [BR:vpe03000]
 Prokaryotic type
  Ribbon-helix-helix
   Other families
    Varpa_1101
SSDB
Motif
Pfam: Aldedh Pro_dh Pro_dh-DNA_bdg PRODH
Other DBs
NCBI-ProteinID: ADU35319
UniProt: E6UWM2
LinkDB
Position
complement(1229961..1233716)
AA seq 1251 aa
MSANNPDPLPSSFIDFADGLTAPSALRAQITAAYRRPEPEALPPLLEQARLPAGQAEEAH
ALAHRIAEQLRNRKNAAGRAGLVQGLLQEYALSSQEGVALMCLAEALLRIPDAETRNALI
RDKIAHGQWQSHAGRSPSVFVNAATWGLLLTGKLVATHSETGLSTVLTRLIGKGGEPLIR
KGVDMAMRMMGEQFVTGETIAQALDNARELEAEGFRYSYDMLGEAALTTEDAKRYRIAYE
DAIHAIGKASNHRGVYAGPGISIKLSALHPRYSRAQHARVMDELYPVLRALTLLAQQYDI
GINIDAEEADRLELSLDLLERLCFEPALAGWNGIGFVIQGYQKRCPFVIDFVIDLARRSR
HRLMVRLVKGAYWDSEIKRAQIEGLEGYPVYTRKAYTDVSYLACARKLLDAPEAIYPQFA
THNAHTLAAIYTMADPSRYQPGQYEFQCLHGMGEPLYEQVVGPLGRPCRIYAPVGTHETL
LAYLVRRLLENGANTSFVNRIADPTIPLEALVEDPVATVEHMAAKEGAVGLPHPAIPLPA
ALYGEQRKNSQGINLANDDSLRLLGETLRATATEQWRSEPLLAEDREASSSWADVLNPAD
HRDVVGQVREATLADVESAVTQAKGIATTWAATPSAERAALLDRAADLLEAQQPRLLGLL
AREAGKTYANAIAEVREAVDFLRYYAAQARIDFSNDTHRALGPMVCISPWNFPLAIFTGQ
VAAALAAGNPVLAKPAEQTPLVAAEAIRVLWQAGVPHAAVQLLPGRGEIVGAALVADARV
QGVMFTGSTEVARILQKTLSARLGANGAPVPLIAETGGQNAMIVDSSALIEQVVTDVMAS
AFDSAGQRCSALRVLCVQEEAADRLIEMLKGAMAESCIGNPARLAVDVGPVIDAEARDNI
ERHIATMRSRGRRVYRQGREYAHDTRQGTYVMPTLIELDNIAELQREVFGPVLHLVRYRR
RDLGALVGQINGTGYGLTLGVHTRIDETIAQIVEHAKAGNVYVNRNIVGAVVGVQPFGGE
GLSGTGPKAGGPLYMYRMLSKRPDDILVRAIADADPGNASPTTQAGAPQVALSALTRWAN
ETNRDALATQCRRFGELSRSGSSRTLSGPTGERNVYTLQPREAVLCLADAETDRLVQLAA
VLSVGSTAIWPANAGAQSLRASLPAEVQQSVAVASDWTSETVVFDAVLHHGDATGLMGVV
HRVASRSGPIVGVRAFAPGDVGIPLESLVVERALSVNTAAAGGNASLMTIG
NT seq 3756 nt   +upstreamnt  +downstreamnt
atgagcgccaacaaccccgaccctctgccctcctcgttcatcgatttcgccgacggcctc
accgcgccttcggccttgcgtgcgcagatcaccgccgcttaccggcgccccgaacccgag
gcattgccgcccctgctcgagcaggcccgcttgccggccggccaagccgaagaagcgcac
gccctcgcccatcgcatcgcagaacaactgcgcaaccgcaagaacgccgccggccgcgcc
ggcctcgtgcaaggcctgctgcaggaatacgcgctctcctcgcaggaaggcgtcgcgctg
atgtgcctggccgaagcgctgctgcgcattcccgatgccgaaacgcgcaacgccctcatc
cgcgacaagatcgcgcatggccagtggcagtcgcatgcggggcgcagcccctcggtgttc
gtcaacgccgcgacctggggcctcctgctcaccggcaagctggtggccacgcacagcgag
acgggcctttcgacggtgctcacgcgcctcatcggcaagggcggcgagccgctgatccgc
aagggcgtggacatggcgatgcgcatgatgggcgagcagttcgtcaccggcgagaccatc
gcgcaggcgctggacaacgcacgcgagttggaggccgagggcttccgctattcgtacgac
atgctcggcgaagcggcgctcaccaccgaagatgcgaagcgctatcgcatcgcgtacgaa
gacgccatccacgcgatcggcaaggcctcgaaccaccgcggcgtgtatgcgggcccgggc
atctccatcaagctctcggcgctgcacccgcgctacagccgcgcacagcacgcgcgcgtg
atggacgagctgtacccggtgctgcgcgcgctcacgctgctcgcgcagcagtacgacatc
ggcatcaacatcgacgcggaagaagccgaccgcctcgagctctcgctcgacctgctggag
cgcctgtgcttcgagccggcgctcgcgggctggaacggcatcggcttcgtgatccagggg
tatcaaaagcgctgccccttcgtgatcgatttcgtgatcgaccttgcgcgccgcagccgc
caccggctcatggtgcgccttgtgaaaggcgcgtactgggacagcgagatcaagcgcgcg
cagatcgaaggcctcgagggctaccccgtctacacgcgcaaggcctacaccgacgtgtcg
tacctcgcctgcgcgcgcaagctgctcgatgcgcccgaggcgatctacccgcagttcgcc
acgcacaacgcccacacgctcgccgcgatctacacgatggcggacccgtcgcgttatcag
ccggggcagtacgagttccaatgcctgcatggcatgggcgagccgctgtacgagcaggtg
gtcgggccgctcggtcggccgtgccgcatctacgcgccggtgggcacgcacgagacgctg
ctcgcatacctggtgcggcgactgctggagaacggcgcgaacacctcgttcgtcaaccgc
atcgcggacccgacgattccgctcgaagcgctggtggaagacccggtcgcgacggtggag
cacatggcggcgaaggaaggcgcggtcggattgccgcacccggccattccattgcccgcg
gcgctctacggcgagcaacgcaagaactcgcaaggcatcaacctcgcgaacgacgacagc
ctgcgcctgctgggcgaaacgctccgcgccacggccaccgaacagtggcgctcagaaccg
ctgctcgcggaggaccgcgaagcctccagcagttgggccgatgtgctgaaccccgcggac
catcgcgatgtcgtcgggcaggtgcgcgaagccacactggccgatgtcgaatcggccgtg
acgcaagccaaaggcatcgcaacgacatgggctgcgacaccgtcggcggaacgcgcagcc
ttgctcgaccgcgcggccgatctgctcgaagcccaacagccgcgcctgctcggcctgctc
gcccgcgaagccggaaagacgtacgccaacgccatcgccgaagtgcgcgaggcagtcgac
ttcctgcgctactacgccgcacaggcacgcatcgatttctccaacgacacgcaccgcgcg
ctcgggccgatggtgtgcatcagcccgtggaattttccgctcgcgatcttcaccggccag
gtggccgccgcgctcgcggccggcaatccggtgctggccaagcccgcggagcagacgccg
ctcgtcgccgccgaggcgatccgcgtgctgtggcaagcaggtgttccgcacgcggccgtt
caactgctgccgggccgcggcgaaatcgtgggcgccgcactggtcgccgatgcgcgcgtg
cagggcgtgatgttcaccggctcgaccgaggtcgcacgcatcctgcagaagacgctgtcg
gcaaggctcggcgctaacggcgcgcccgtgccgctcatcgccgagaccggcggccagaac
gcaatgatcgtggactcgtccgcgctgatcgaacaggtcgtcaccgacgtgatggcctcg
gctttcgacagcgccggccagcgatgctcggcactgcgcgtgctgtgcgtgcaagaggaa
gcagccgaccgcctcatcgagatgctcaaaggcgcgatggccgagagctgcatcggcaac
cccgcgcggctggccgtcgacgtaggcccggtgatcgacgccgaagcgcgcgacaacatc
gagcgccacatcgccaccatgcgcagccgcggccgccgcgtctaccggcaaggccgcgag
tacgcgcacgacacgcgccagggcacctacgtgatgccgacgctcatcgagctcgacaac
atcgcggagctgcaacgcgaagtgttcggaccggtgcttcatctggtgcgctatcgccgc
cgcgacctgggcgcgctggtcgggcagatcaacggcacgggctacgggctcacgctgggc
gtgcacacgcgcatcgacgaaaccattgcgcagatcgtggagcacgcgaaggcgggcaac
gtttatgtgaaccggaacatcgtcggcgcggtcgtgggcgtgcagccgttcggcggcgaa
ggcctgtcgggcacggggccgaaggcgggcgggccgctgtacatgtaccgcatgctgtcg
aagcggccggacgatatattggtgcgcgccattgcggatgcggacccgggaaacgcatcg
ccgaccacacaagccggagcaccacaagtcgcgctgtcggctttgacccgttgggctaac
gaaacgaaccgcgatgcactggcaacccaatgccgacgctttggagaactctcgcgctcg
ggcagttcgcgcacgctgtccggccccacgggcgagcgcaacgtctacacgctgcagcca
cgcgaagccgtgttgtgccttgccgatgcggaaactgatcggctggtgcaactggcagcc
gtgctctcggtgggcagcacggcgatatggcccgcgaatgcgggcgcgcaaagtctgcgc
gcatcgctgccggccgaggtgcagcagtcggttgccgttgcgagcgactggacttcggag
accgtggtcttcgatgccgttcttcatcacggcgatgcgacgggtctcatgggcgtcgtg
catcgcgtcgcatcgcggtcggggccgatcgtcggcgtgcgcgcgttcgctccgggggat
gtgggcattccgcttgaaagccttgtggttgagcgtgcgttgagcgtgaataccgctgct
gctggtggcaacgcgagcttgatgacgatcggttga

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