Variovorax paradoxus EPS: Varpa_2295
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Entry
Varpa_2295 CDS
T01392
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00362
Benzoate degradation
vpe01100
Metabolic pathways
vpe01120
Microbial metabolism in diverse environments
vpe01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Varpa_2295
Enzymes [BR:
vpe01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
Varpa_2295
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GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
ADU36500
UniProt:
E6UWV5
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All DBs
Position
2499118..2500329
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AA seq
403 aa
AA seq
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MSIFEGFLSTSETLGAFSDRAFVDAMLRFEAALARAQAAEGLIPESAAHSIVGSCKVELF
DVAKIVRESGRAGSVAIPLVKALREAVGLFNAEAAPFVHFGSTSQDVIDSAMALVTREAV
ALVETDLAKAADALLRLATQHAETPMLARTLMQPASVTSFGFKCAGWAAPLVRSRLRLRE
AAKHALQLQLGGAVGTLAQMKGQGAAVRKRMAKELGLGDPGATWHTQRDEWVALGCELGL
MTGSLGKIAVDIALLGQYEVAEVAEPSEPGRGGSSAMPHKRNPVASMVAIAAAHRAPQRV
AALLGAMPQQHERALGAWQAELAEWPQLLMSAHGSVRAMAGALPGLQVDAARMRANIDRL
RAELPRDAADEWFDPALAIGAGQTALAEVKALQTQLKDKELSQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcgaaggcttcctctccacatccgaaacactcggcgctttcagcgaccgc
gcattcgtcgacgccatgctgcgcttcgaggccgcgctcgcacgtgcgcaggcggccgaa
gggctgattcccgagagcgccgcgcactccatcgtcgggagctgcaaggtcgagctgttc
gacgttgccaagatcgttcgcgagagcggccgcgcgggcagcgtggcgattccgctggtc
aaggcgctacgcgaagccgtgggcctcttcaatgccgaggccgcgccgttcgttcacttc
ggcagcaccagccaggacgtgatcgacagcgcgatggcgctggtcacgcgcgaggcggtg
gcgctcgtcgaaaccgaccttgccaaggccgccgatgcgctgctgcgccttgccacgcag
cacgccgaaacgccgatgctcgcgcgcacgctgatgcagccggcctcggtgaccagcttc
ggcttcaagtgcgcgggctgggccgcgccgctggtgcgcagccgcttgcgcctgcgcgaa
gcggcgaagcacgcgctgcaactgcagttgggcggcgccgtcggcacgctcgcgcagatg
aaggggcagggcgccgcggtgcgcaagcgcatggcgaaggaactgggcctcggcgacccc
ggcgccacctggcacacgcagcgcgacgaatgggtggcgctcggctgcgagctcgggctc
atgacaggcagcctcggcaagatcgccgtcgacatcgcgctgctcggccagtacgaagtg
gccgaagtggcggagcccagcgaacccggccgcggcggctcgtcggcgatgccgcacaag
cgcaacccggtggcctcgatggtcgccatcgccgccgcgcaccgcgcgccgcagcgcgtg
gccgccttgctcggcgcgatgccgcagcagcacgaacgcgccctcggcgcctggcaggcc
gagctggccgaatggccgcagctcctgatgtcggcgcacggcagcgtgcgcgcgatggcc
ggcgcattgcccggcctgcaggtggacgccgcgcgcatgcgcgccaacatcgaccggctg
cgcgccgagctgccgcgcgatgcggcggacgaatggttcgaccccgcgctcgccatcggc
gcgggccagaccgcgctggcggaagtgaaggcgctgcaaacccaactcaaggacaaggaa
ctctcgcaatga
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