Variovorax paradoxus EPS: Varpa_3369
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Entry
Varpa_3369 CDS
T01392
Name
(GenBank) Cobaltochelatase
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00860
Porphyrin metabolism
vpe01100
Metabolic pathways
vpe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Varpa_3369
Enzymes [BR:
vpe01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
Varpa_3369
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
ADU37554
UniProt:
E6UV42
LinkDB
All DBs
Position
complement(3629250..3633287)
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AA seq
1345 aa
AA seq
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MTRFLVALLWMVLAFCAHAEPDEPSRIVVLSTSLVSPARVVRLQEAAHEVGLPLQVVSAA
KDSPEALAAALSGARLLVIDAPHISVAQAAAARFGDVVSRSAVPYVLIGEFALVAKGQAS
NAAPLAAERGVDAVWAQRLREYWRFAGTVNLKSAMKALAQIDDVNGLPPPVPTPLSGFYH
PRWTRIETDIAAADRLAGTAGTVAIAVNSATVTGDDTGWLDQLIGALEQRGLRAYAFYGP
RQQKDLFFRMTHAAGGEGRRVADLIVNASLVFTPNERKADLERIGVPVLQTLPSLAMDAR
QWAESKDGLAQTDIAAYYSPSELAGMTDPMLVSARDAATGTLQPLPAQIDAVAGKAAALL
RLQRTPTADRRVAMLVYNYPPGEANFGASFLNVPRSVNNMLAAMQSAGYRTEIPGADALI
AQVQATMKAYYPVDGVDALQPLLGKGLADSLPLARYVAWFRALPAETQRRIETYWGPPEK
STMLRPVAGEPAFVIPRVQFGNVVVLRQPPRFEPGTQVAGKAEQVYHRSAIPLGHSYLAT
YLWLRTQFGASAVVHVGTHGTVEWSAGKERGLSVQDDPLLALGDLPNVYPYIMDNLGEAT
TAKRRGRATMVSHSTPMFAPAGFRPGVQAMHDRMHDWETLSLGPVKAAMEKQLTAEFVEQ
HYDRDLKWTPARIRADFTGFIAVLHPYLDELALTAQPLGLATFGQAPDAERRRMTILQIL
GKPLAEALGEDVHEAFLIDAKNIAASRPARWIEVALEDAEAASAMGADAAKAEALRTMAE
RAQKIDAALAHNEEIEGLLTALDGRYLKASYGGDPVRNPDSLPTGRNLYGFDPSRVPTRT
AWDVGVAAMDAWIAEHAKAHAGKPPEKIAFTLWAGEASRHQGVLESQAFYAMGVKPRWDE
ARRIAGIEVLPASVLRRPRMDVLISVTGSYRDQFPNVMRWLDEAVQQVAALNEPGNAVAQ
HSEALARKLRAEGATPAEAKRWSTARVFSNEQGSYGAGLEEAALASDVWTSQRRGGGDAQ
MAQLYMDRMGHAYGQGLDGARRPGAYAGNLAQVDAALMARTSNLYGVLTNDDPFQYLGGI
AQAVRQLTGKDPALYVQNLRDAGTVRTDTAAGAIAREMQTRYLHPQWIAAQKAEGYSGTL
QVLKTAQFLWGWQVTAPGTVRQDQWQSLHDVYVRDRYKLGTREWLEGDNRAAFAQTLERM
LDAVRLNYWKPDDATRRELAKAYAEAVRATGLRERNTGVQRFVQAELAPRVAAPVEVQKA
PAAAPAPTPSPAPAAPDKPTSVSDDSAQPVTGLKLDPTPDEAPPPKAETVVLRLWVAFGA
ALLVALGAFAQWRRGRARDPAATTA
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcggtttcttgtagcactcctgtggatggtgctggcgttctgtgcgcacgccgag
ccggacgagccttcgcgcatcgtggtgctgagcacgtcgctggtgtcaccggcgcgcgtg
gtgcggctgcaagaagcggcgcatgaggtgggcttgccgctccaagtggtgtcggctgcg
aaggattcgcctgaggcgctggctgcggcactcagcggtgcgcggctgctggtgatcgac
gcgccgcacatcagcgtggcgcaggccgcggcggcgcgattcggcgatgttgtttctcgc
agtgccgtgccgtatgtgttgatcggcgagttcgcgctcgtcgccaaggggcaagcctcc
aacgcagcgccgctcgctgccgagcgcggcgtcgatgcggtttgggcacagcggctgcgc
gagtactggcggttcgcgggcacggtcaacctcaagtcggcgatgaaggcgctggcccag
atcgacgatgtgaatggcctgccgccgcccgtgccgacgccgctctcgggcttctatcac
ccacgttggacgcgcatcgagaccgacatcgcggcggcggaccgactggctggcaccgca
ggaaccgtcgccattgccgtcaacagcgccaccgtcacgggcgacgacaccggctggctg
gaccaattgatcggcgcgctcgaacaacgcggcctgcgcgcctacgctttctacggcccg
cgccagcagaaggacctgttctttcgcatgacgcatgcggccggtggagaagggcgacgc
gtggccgacctgatcgtcaacgcctcgctggtcttcacgccgaacgagcgcaaggccgat
ctcgaacgcatcggcgtgccggtgctgcagacgctgccgtcgctcgccatggacgccagg
cagtgggccgagagcaaggacggcctcgcgcagaccgacattgccgcctactacagcccg
agcgagctggccggcatgaccgacccgatgctcgtgagcgcacgcgatgccgccaccggc
acgctgcagccgctgcccgcgcagatcgacgccgtggctggcaaggcagccgcactgctg
cgcctgcagcgcacgccgaccgcggaccggcgcgtcgcgatgctggtctacaactacccg
ccgggcgaggcgaacttcggcgcgtcgtttctcaacgtgccgcgcagcgtgaacaacatg
ctggcggcgatgcagtcggcgggttaccgcaccgagatacccggtgcggacgcgctcatc
gcgcaggtgcaggcgacgatgaaggcgtactacccggtcgatggcgtcgatgcgttgcag
ccgctgctcggcaaggggctggccgattcgctgccactggcgcgctatgtcgcatggttt
cgagcgctgcctgcggagacgcagcgccgcatcgagacctactggggaccgcccgagaaa
tcgaccatgctgcggccggtcgcgggcgagccggccttcgtcatcccgcgcgtgcagttc
ggcaacgtcgtcgtgctgcgccagccgccgcgcttcgagcccggcacgcaggtggcgggc
aaggccgagcaggtctatcaccgctcggcgattccgctcggccacagctatctggcgacc
tacctctggcttcgcacgcagttcggcgccagcgcggtcgtgcatgtcggcacgcacggc
acggtcgaatggtcggcgggcaaggagcgcgggctctcggtgcaggacgatccgctgctc
gcgctcggcgacctgccgaatgtctacccgtacatcatggacaacctcggcgaagccacc
accgccaagcgccgcggccgcgcgacgatggtgagccattcgacgccgatgttcgcgccc
gcgggctttcgccccggcgtgcaggcgatgcacgatcgcatgcacgattgggagacgctg
tcgctcgggccggtgaaggccgcgatggaaaagcagctcaccgcggagttcgtagagcag
cactacgaccgcgacctgaaatggacgcccgcgcgcattcgcgccgacttcacgggcttc
atcgccgtgctgcatccgtacctcgacgaactagcgctgaccgcgcagccgctgggcttg
gcgaccttcgggcaggcgccggatgcggagcggcgccgcatgacgatcctgcagatcctc
ggcaagcccttggccgaggcgctgggcgaagacgtccatgaagccttcctcatcgacgcg
aagaacatcgcggcgtcgcgtccggcgcgatggatcgaagtggcgctcgaggatgccgaa
gccgcgagcgcgatgggcgcggatgccgcgaaggccgaagcactgcgaaccatggccgag
cgcgctcaaaagatcgacgccgcactcgcccacaacgaagaaatcgaaggcctgctcact
gccctcgatggccgctacctcaaggccagctacggcggcgacccggtgcgcaaccccgac
agcctgccgaccggccgcaacctctacggcttcgacccgagccgcgtgccgacgcgcacc
gcgtgggacgtcggcgtcgccgcgatggatgcgtggatcgccgagcacgccaaggcccac
gccgggaagccgcccgagaagattgctttcacgctctgggccggcgaagcctcgcgccat
caaggtgtgttggagagccaggctttctacgcgatgggcgtgaagccgcgctgggacgag
gcaaggcgcatcgcgggcatcgaggtgctgcccgcgtcggtgctgagacggccgcgcatg
gacgtgctgatcagcgttaccggttcgtaccgcgaccagttcccgaacgtgatgcgttgg
ctcgacgaggcggtgcagcaggtggctgccctgaacgagcctggcaatgcggtcgcgcag
cacagcgaggcgctggcccgcaagctgcgcgcggaaggcgcgacgccggccgaggcgaag
cgctggtcgaccgcgcgcgtgttctcgaacgagcagggcagctacggcgccgggctcgaa
gaagctgcgctcgccagcgacgtgtggacttcgcagcggcgcggcggcggcgatgcgcag
atggcgcagctctacatggaccgcatgggccacgcctatggtcaggggcttgacggcgcc
cggcgacccggtgcctacgcgggcaatctcgcgcaggtcgatgcggcgctgatggcgcgc
acgtcgaatctctacggcgtgctcaccaacgacgacccgttccagtacctgggcggcatt
gcgcaggccgtgcggcaactcaccggcaaggaccccgcgctgtacgtgcagaacctgcgc
gacgccggcacggtgcgcaccgacacggccgccggcgccatcgcccgcgaaatgcagacg
cgctatctgcacccgcaatggatcgccgcgcagaaggccgagggctacagcggcacgctg
caggtgctcaagaccgcgcagttcctctggggctggcaggtcaccgcgcccggcaccgtg
cggcaggaccagtggcagtcgctgcacgacgtgtatgtgcgcgaccggtacaagctgggc
acgcgcgaatggctggaaggcgacaaccgcgccgccttcgcgcagacgctggagcgcatg
ctcgatgcggtgcgcttgaactactggaagcccgatgacgcgactcggcgcgagctggcg
aaggcttacgccgaggccgtgcgcgctacgggcctgcgcgagcgcaatacgggggtgcag
cgcttcgtgcaggcggaactggcgccgcgggttgcagcgccggtggaagtgcagaaggcg
cctgcagcggcgccggcccccacgccttcgccggcaccggcagcacccgataagcccaca
tccgtgagcgacgacagcgctcagcccgtgaccggcctcaagctcgatcccacgcccgac
gaggcaccgccaccgaaggccgagaccgtggtgctccgcctctgggtcgccttcggtgcc
gcgctgcttgtcgcactcggcgccttcgcgcagtggcggcgcggccgggcgcgagacccg
gctgccaccactgcctga
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