Variovorax paradoxus EPS: Varpa_3847
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Entry
Varpa_3847 CDS
T01392
Name
(GenBank) cobaltochelatase, CobN subunit
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
vpe
Variovorax paradoxus EPS
Pathway
vpe00860
Porphyrin metabolism
vpe01100
Metabolic pathways
vpe01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Varpa_3847
Enzymes [BR:
vpe01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
Varpa_3847
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
ADU38028
UniProt:
E6V2W2
LinkDB
All DBs
Position
complement(4139930..4143742)
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AA seq
1270 aa
AA seq
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MHLLSTQPGRFVEDDSVVTRLDQTPGDIVVLSSADTTLALLAAARTALAATDPGYPSLRL
ANLMYLRQPASLDLYVDEVLQHARVVVVDHLGAESAWAYGLQQLEELAKRKGQQLAMFSG
DLQEDEDLLARGTVPRAVGRQLWQYMRAGGAGNAMQFLRAVAFHGLGHGEAPLPPRSLPQ
VALHVPRGIDAAHTVAGIDDLRAGWHADAPVVALVFYRSHLLSGNTAAFDALAAALHAEG
LNPLPVALDSLKDPLCLSAFRGLCSEHDVQLVLNTTAFAALGQGAQDDTGEALALAGDAP
VLQVIVSGGNREDWLADSQGLRPRDIAMQIALPEMDGRIITRAVSFKGLSHRCELTQTEV
VSYQPEPDRIAFVAELARRWCRLRSLPVADKRIALILANYPGSEGRIGSGVGLDTPASVI
AILRAMQAEGYVLGDGIPADGDALMQTLQEGIANDPAQWSARPAWQSYALADYRARLAAL
PEGMAGAIDARWGTPEQDPMLRQDRFMIAGLRLGRVFVGIQPARALGTLGAADYASYHDA
ELVPPHSYLAFYFWLRDAFAIDAVVHVGKHGNLEWLPGKSIALSQTCWPDAILGPLPNVY
PFIVNDPGEGAQAKRRTQAVIVDHLMPPLTRAENHGPLQDLERQVDEYYDALLVDARRAK
VLRAQILAAVRAQHLVEELGMPGAEDDAVLARVDAYLCELKETQIRDGLHVFGASPEARL
RRDTLLALARYPSADGTGANAGLLGAMAQDLLPGEAFDPLDIDAAKPWQGTRPELLQSVS
ADAWRHHGDTRERLELLAQRLLEENVCPPDMPHTAAVMGRIERSLAPALDACGPHELHQL
SRALQGRFVPPGPSGSPSRGRPDVLPTGRNFYAVDTRAIPTPTAWMLGLKSAAQLVERHL
QEHGDYPVALGLSVWGTATMRTGGDDLAQAFALIGVRPKWAPGSQRVVDFEVLPTVGLGR
PRIDVTLRISGFFRDAFPNAVQMFDAAVQAVAAQEDEDAERNPIRARILREAAALEAEGS
TAEDARTQAGWRVFGSAPGSYGSGLQPLFDHGDWQTDNDLSNAYVGGSAHAYGQGSDGVP
AADALVRRLRTMNVVLQNQDSREHDLLDSNDYYQFQGGMAAAVRHLSGQQPAMYHGDHGN
PQAPRVRTLKEEISRVIRARVVNPKWIDGVKRHGYKGAFEMAATVDYLFGFDATARVVGD
HQYAMVADAYVLDADTRDFVNQHNPRALHDMLSRLLEAMQRGLWESPGDYQTQLENLLLD
HEQQMEGTLR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgctgagcacccagcccggacgcttcgtcgaagacgacagcgtcgtcacccgg
ctcgaccagacgccgggcgacatcgtggtgctcagctcggccgacaccacgctcgcgctg
ctcgccgctgcgcgcacggcgctggcggccaccgaccccggctacccgtcgctgcggctg
gccaacctcatgtacctgcgccagccggcctcgctcgacctgtacgtcgacgaggtgctg
cagcatgcgcgcgtggtggtggtcgatcacctgggtgccgagtcggcctgggcctacggg
ttgcagcagctcgaagagctggccaagcgcaagggccagcagctcgcgatgttctcgggc
gacctgcaggaagacgaagacctgctcgcgcgcggcacggtgccgcgtgcggtcggccgc
cagctctggcagtacatgcgcgcgggcggtgcgggcaacgcgatgcagttcctgcgcgcg
gtggccttccatggcctcggccacggcgaggcgccgctgccgccgcgcagcctgccgcag
gttgcgctgcatgtgccgcgcggcatcgatgcggcgcacaccgtggccggcatcgacgac
ctgcgcgccggatggcatgcggatgcgccggtggtggcgctggtgttctatcgatctcac
ttgctgtcgggcaatacggcagctttcgatgcgctcgctgccgcgctgcatgctgaagga
ttgaacccgctcccggtcgcgctcgattcgctgaaagacccgctgtgcctgtccgcattt
cgcggcctgtgcagcgagcacgatgtccaactcgtgctgaataccaccgccttcgccgcg
ttggggcagggcgcacaggacgacacaggcgaagccctcgcgctcgccggcgatgcaccg
gtgctgcaggtgatcgtgagcggcggcaatcgcgaagactggctggccgacagccagggc
ctgcgcccgcgcgacatcgcgatgcagatcgcgctgcccgaaatggacggccgcatcatc
acgcgcgccgtgagcttcaagggcctctcgcaccgctgcgaactcacgcagaccgaggtg
gtgagctaccagcccgagccggatcgcatcgccttcgtggccgagctggcgcgccgctgg
tgtcgccttcgcagcctgccagtggccgacaagcgcatcgcgctgatcctcgcgaactat
ccaggcagcgaagggcgcatcggcagtggcgtggggctcgacacgccggcttcggtgatc
gcgatccttcgcgcgatgcaagccgagggctatgtgctcggcgatggcatccctgccgat
ggcgatgcgctgatgcagacgctgcaggagggcatcgcgaacgatcccgcccaatggtct
gcgcgccccgcctggcagagctacgcgctcgccgactaccgcgcgcggctcgcggccttg
cccgaaggcatggccggtgccatcgatgcgcgctggggcacgcccgagcaggacccgatg
ctgcgccaggaccgcttcatgatcgccgggcttcgattgggccgcgtgttcgtcggcatt
cagcccgcacgcgcactcggcacgctgggcgccgccgactacgcgagctaccacgacgcc
gaactcgtgccgccgcacagctacctcgctttctatttctggctgcgcgatgcgttcgcc
atcgacgcggtcgtgcatgtcggcaagcacggcaacctcgaatggctgccgggcaagagc
atcgcgctttcgcagacctgctggcccgacgcgatcctcgggccgctgccgaacgtgtac
cccttcatcgtcaacgacccgggcgagggcgcgcaggccaagcggcgcacgcaggccgtc
atcgtcgatcacctgatgccaccgctcacgcgcgccgagaaccacggcccgctgcaggac
ctggagcgccaggtcgacgagtactacgacgcgctgctggtcgatgcgcggcgcgcgaag
gtgctgcgcgcgcagatcctcgcggccgtgcgggcgcagcatctggtcgaggagctgggc
atgccgggcgcagaagacgatgcggtgttggcgcgcgtcgatgcgtacctgtgcgagctg
aaggaaacgcagattcgcgacgggctgcatgtgttcggcgcctcgccggaggcgcggctg
cggcgggacacgctgctcgcgctcgcacggtatccgtccgcggacggcacgggtgcgaat
gccggtctgctgggcgcgatggcgcaggacctgctgccgggcgaagccttcgatccgctc
gacatcgacgcggccaagccatggcaaggcacgcggcctgaattgctgcaatcggtgagt
gcagatgcatggcggcatcacggcgacacgcgggagcggctggagcttctcgcacagcgc
ttgcttgaggaaaacgtgtgcccgcccgacatgccgcacaccgctgccgtgatgggccgc
atcgaacgaagcctcgcgcccgcgctcgacgcctgcggcccgcacgagctgcatcagctt
tcgcgcgcgttgcaaggccgtttcgtcccccccggcccgagcggttcgccttcgcgcggc
cgccccgacgtgctgccgaccggccgcaacttctacgcggtcgacacgcgcgccatcccc
acacccaccgcctggatgctcggcctcaagtccgccgctcaattggtcgaacgccatctg
caggagcacggcgactaccccgtggcgcttggcctctcggtctggggcaccgccacgatg
cgcaccggcggcgacgatctcgcgcaggctttcgcgttgatcggcgtgcggcccaagtgg
gcaccgggcagccagcgggtggtcgatttcgaggtgctgcccacggtcgggctcggtcgt
ccgcgcatcgatgtgacgctgcgcatctcggggttcttccgcgatgcctttcccaatgcc
gtgcagatgttcgatgccgcggtgcaggccgtcgctgcgcaggaagacgaggacgccgag
cgcaacccgatccgcgcacgcatcctgcgggaagcagccgcgctcgaagcagaaggttcg
accgccgaagacgctcgcacccaagccggctggcgcgtgttcggctccgcgccgggcagc
tacggctccggcctgcagccgctcttcgaccacggcgactggcagaccgacaacgatctc
tccaacgcctacgtaggcggcagcgcgcacgcgtacgggcagggcagcgacggcgtgccc
gcagccgacgcgctggtgcggcgcctgcgcaccatgaacgtcgtcctgcagaaccaggac
agccgcgagcacgacctgctcgactccaacgactactaccagttccagggcggcatggcc
gccgccgtgcgccacctgagcggccagcagccggcgatgtaccacggcgaccacggcaac
ccgcaggcaccgcgcgtgcgcacgctgaaggaagaaatcagccgcgtgatccgcgcgcgc
gtggtcaacccgaagtggatcgacggcgtcaagcgccacggctacaagggcgccttcgag
atggcggcgacggtggactacctcttcggcttcgacgccaccgcgcgcgtggtcggcgac
caccagtacgcgatggtggccgatgcctacgtgctcgatgccgacacccgcgatttcgtg
aatcaacacaatccgcgcgcgctgcacgacatgctgagccgtttgctcgaagccatgcag
cgcggcctgtgggaatcgcccggcgactaccagacccaactcgaaaacctgctgctcgac
cacgagcagcagatggaaggaaccctccgatga
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