Variovorax paradoxus EPS: Varpa_3984
Help
Entry
Varpa_3984 CDS
T01392
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K22589
threo-3-hydroxy-L-aspartate ammonia-lyase [EC:
4.3.1.16
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Varpa_3984
Enzymes [BR:
vpe01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.16 threo-3-hydroxy-L-aspartate ammonia-lyase
Varpa_3984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
adh_short
FeS
Motif
Other DBs
NCBI-ProteinID:
ADU38156
UniProt:
E6V437
LinkDB
All DBs
Position
complement(4296500..4297456)
Genome browser
AA seq
318 aa
AA seq
DB search
MQLPTYDDVTAAAARLEGHAHRTPVLQSTTANERWGAQFFFKCENFQRMGAFKFRGAFNA
LSKFDAEQRKGGVIAFSSGNHAQAIALSARLLSMPAVIVMPKDAPAAKVAATQGYGAEVV
LYDRFTEDREALTKKLAQERGMTMIPPYDHPDVLSGQGTAVKELIEETGPLDHLFVCLGG
GGLLSGSALSARALSPDCKICGVEPEAGNDGQQSFRTGKIVHIETPKTIADGAQTQHLGQ
YTFGIIQRDVNDIFTVTDDQLVEAMRFFAERMKMVVEPTGCLAFAGAIAAGKAIAGQRVG
IVISGGNVDLSRYAALLA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcaactccctacctacgacgacgtcaccgccgcggccgcgcggctcgaaggccatgcc
caccgcacgccggtgctgcaatcgaccaccgccaatgagcgctggggcgcgcagttcttc
ttcaagtgcgagaacttccagcgcatgggcgcgttcaagttccgcggtgcgttcaacgcg
ctttccaaattcgatgccgagcagcgcaagggcggcgtcatcgccttctcgtcgggcaac
cacgcgcaggccatcgcgctgtcggcgcggctcctgtcgatgcccgccgtgatcgtgatg
cccaaggacgcgccggccgccaaggtcgcggccacgcagggctacggtgccgaagtggtg
ctgtacgaccgcttcaccgaagaccgcgaggcgctcacgaagaagctcgcacaggaacgc
ggcatgacgatgattccgccgtacgaccaccccgatgtgctctcggggcagggcacggcg
gtgaaggaactgatcgaggagacggggccgctcgaccatctgttcgtgtgcctgggcggc
ggcgggctgctgtctggctcggcgctgtcggcgcgtgcgctgtcgcccgattgcaagatc
tgcggcgtggagcccgaggcgggcaacgacgggcagcagtcgtttcgcacggggaagatc
gtgcacatcgaaacgcccaagaccatcgccgatggcgcgcagacgcagcacctgggccag
tacacgttcgggatcatccagcgcgatgtgaacgacatcttcacggtgaccgacgatcag
ctcgtcgaggcgatgcgcttcttcgccgagcgcatgaagatggtggtggagccgacgggg
tgccttgccttcgcgggtgccattgcggcaggcaaggcgatcgcgggtcagcgcgtgggt
atcgtgatcagcggcggcaacgtcgacctgtcgcgctacgcggcgctgctcgcttaa
DBGET
integrated database retrieval system
