Variovorax paradoxus EPS: Varpa_4515
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Entry
Varpa_4515 CDS
T01392
Name
(GenBank) major facilitator superfamily MFS_1
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vpe02000
]
Varpa_4515
01504 Antimicrobial resistance genes [BR:
vpe01504
]
Varpa_4515
Transporters [BR:
vpe02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
Varpa_4515
Antimicrobial resistance genes [BR:
vpe01504
]
Gene variants
Tetracycline resistance genes
Transporters
Varpa_4515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_2
MFS_1_like
LacY_symp
Folate_carrier
TRI12
OATP
Motif
Other DBs
NCBI-ProteinID:
ADU38682
UniProt:
E6UV88
LinkDB
All DBs
Position
complement(4897971..4899230)
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AA seq
419 aa
AA seq
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MSATLPAPRVRRAALAFIFVTVLIDFLAFGLILPGLPHLVERLAGGSTATAAYWIAVFGT
AFAAIQFVSSPIQGALSDRFGRRPVILLSCLGLGVDFVFMALADSLPWLFVGRVVSGVFS
ASFTIANAYIADVTPPEDRARSYGIVGAAFGMGLVFGPVLGGQLSHIDPRLPFWFAAGLT
LLSFCYGWFVLPESLSPERRARKFDWSHANPLGSLLLLKRYPQVFGLAAVIFLVNLAQYV
YPSVFVLFADYRYHWKEDAVGWVLGAVGVLSVLVNALLIGPGVKRFGERRALLFGMGFGV
LGFIVIGLADAGWMLLAALPFGTLLAFAGPAAQALVTRQVGAAEQGRIQGALTSLVSVAG
IVGPTMFAGSFGYFIATDAPVHLPGAPFFIAALFLCIGTLIAWRYAQAKATAAAVPEPT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccacccttccagcaccgcgcgtgcgccgcgccgcgctcgccttcatcttcgtg
acggtgctgatcgacttcctcgcgttcggcctgatcctgcccggcctgccgcacctggtg
gagcgcctggccggcggcagcaccgcgacggcggcgtactggatcgcggtgttcggcacc
gcgttcgcggcgatccagttcgtgagttcgccgatccagggcgcgctgtccgatcgcttc
gggcggcgaccggtgatcctgttgtcgtgcctcggcctcggcgtggatttcgtgttcatg
gccctggccgacagcctgccgtggctgttcgtcggccgggtcgtgtccggcgtgttctcg
gccagcttcaccatcgccaatgcctacatcgccgatgtgacgccgccggaagatcgcgcc
cgcagctacggcatcgtgggcgcggccttcggcatgggcctggtgttcgggcctgtgctc
ggcgggcaactgagccacatcgatccgcgcctgccgttctggttcgcggccggcctgacg
cttctgagcttctgctacggatggttcgtgctgcccgagtcgctgtcgccggagcggcgc
gcccgcaagttcgactggtcgcacgccaatccgctcggctcgctgctgctgctcaagcgc
tatccacaggtgttcgggctggcggcggtgattttcctcgtcaacctggcccagtacgtc
tacccgagcgtgttcgtgctgttcgccgactaccgctaccactggaaggaagacgcggtg
ggctgggtgctcggcgcggtgggcgtgctcagcgtgctggtcaacgcgctgttgatcggg
ccgggcgtgaagcgcttcggcgagcgccgtgcgctgctgttcggcatgggcttcggcgtg
ctcggtttcatcgtcatcggcttggctgatgcgggctggatgcttctggccgcgctgccg
ttcggcaccttgctggcgttcgccgggccggcggcgcaggcgctggtcacccgccaggtc
ggcgcggccgagcagggccgcatccagggcgcgctgacgagcctggtgtcggtggcgggc
atcgtcgggccgacgatgttcgccggcagcttcggctatttcatcgccacggacgcgccc
gtccacctgccgggcgcgccgttcttcatcgccgcgctgttcctctgcatcggcacgctg
atcgcgtggcgctacgcacaggcgaaggcgacggcagcagccgtgcccgagccgacctga
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