Variovorax paradoxus EPS: Varpa_5022
Help
Entry
Varpa_5022 CDS
T01392
Name
(GenBank) methyltransferase
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vpe
Variovorax paradoxus EPS
Brite
KEGG Orthology (KO) [BR:
vpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpe03009
]
Varpa_5022
Enzymes [BR:
vpe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
Varpa_5022
Ribosome biogenesis [BR:
vpe03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Varpa_5022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_11
RsmJ
Motif
Other DBs
NCBI-ProteinID:
ADU39182
UniProt:
E6V343
LinkDB
All DBs
Position
complement(5465080..5465736)
Genome browser
AA seq
218 aa
AA seq
DB search
MPQKKATAAPRPPAAKRPARPVRPNEVRIIGGQWKRTRLAVADKPDLRPTPDRVRETLFN
WLASLAGAGGGELPGWHCVDAFAGTGALGLEAASRGAANVLLCEQDAGLIAQLQAAKTKL
SAEAVRIDRGNGVTALERTTAGSLHAVFLDPPFESVALYEPALRAAARTLRPGGVVYLEA
PRQWNDEELAAFGLASFRYLKAGAVHAHLLRLASEATA
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaaagaaagccaccgcagcccctcgtccgcccgcagccaagcgccccgcgcgc
cctgtgcgacccaacgaggtccgcatcatcggcggccaatggaaacgcacccgcctcgcg
gtggccgacaagcccgacctgcgccccacgcccgaccgcgtgcgcgagacgctcttcaac
tggctcgcaagcctggccggcgcgggtggcggcgaactgccgggctggcattgcgtcgat
gccttcgcaggcaccggcgcactgggcctggaggccgcatcgcgcggcgcggcgaatgtg
ttgctgtgcgagcaggacgccgggctgatcgcgcaactgcaggccgccaagaccaagctg
tcggccgaggccgtgcgcattgaccgcggtaacggcgtcacggcgctcgagcgcacgacg
gcgggcagcctgcacgccgtcttcctcgacccgcccttcgaaagcgttgcgctctatgaa
ccggccttgcgcgccgcggcccgcacgctgcgccccggcggcgtcgtttatctcgaagcc
ccgcgccaatggaacgacgaggaactggcagccttcggcctcgcaagctttcgttacctg
aaagccggcgccgtgcatgcccacctgttgcgtctggcctcggaggcaactgcataa
DBGET
integrated database retrieval system
