KEGG   Variovorax paradoxus EPS: Varpa_5153
Entry
Varpa_5153        CDS       T01392                                 
Name
(GenBank) type II secretion system protein E
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
vpe  Variovorax paradoxus EPS
Pathway
vpe02020  Two-component system
Brite
KEGG Orthology (KO) [BR:vpe00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Varpa_5153
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vpe02044]
    Varpa_5153
   02035 Bacterial motility proteins [BR:vpe02035]
    Varpa_5153
Enzymes [BR:vpe01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Varpa_5153
Secretion system [BR:vpe02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   Varpa_5153
Bacterial motility proteins [BR:vpe02035]
 Pilus system
  Pilus assembly proteins
   Varpa_5153
SSDB
Motif
Pfam: T2SSE AAA_16 Dynamin_N AAA_29 AAA_28 Mg_chelatase FtsK_SpoIIIE MCM AAA_2 Zeta_toxin AAA_7
Other DBs
NCBI-ProteinID: ADU39310
UniProt: E6V556
LinkDB
Position
5602521..5603837
AA seq 438 aa
MSTDIEFADDDQTFINSQQFQDIKSWTHDHLLSRIEELGAEFGRWSRASIQQFVELEVDS
FVRLRRVPINDREMQLIADALTKELAGFGPLEDLLNDPAVEDILINGHTNVYVSRNGILE
RETLRFADTEHVMRIVRRILAPLGRRLDEANPMVDARLPDGGRINVIIEPLAIDGLSVSI
RKFRKEPLTPADLVKLGTFDAGMAQLLEIAVRSRCNILVSGGTSSGKTSLLNALASFIPS
RERVITIEDTAELSLGTSHVVRLESRPGGFDGAGVVSIRDLLRNSLRMRPDRIIVGEVRG
AEVIEMMQAMNTGHEGSMGTIHASSPRECLYRLEMLAGFAGYQGSETSLRRQIANAIDFI
VQIGRLSGGQRRILSLSEVTGVNDNIVAMQELYRYEPIVSPDGEERDRWVSLGIAPHSPK
ITRFRQTLARPQPGEHRA
NT seq 1317 nt   +upstreamnt  +downstreamnt
atgtccaccgatatcgaatttgccgacgacgaccagacgttcatcaactcgcagcagttc
caggacatcaagagttggacacacgaccatctgctgagccgcatcgaagagttgggcgcg
gagttcggccgctggtcgcgcgcctcgattcagcagttcgtcgaactcgaggtcgacagc
ttcgtgcgcctgcgccgcgtgccgatcaacgaccgcgagatgcagctcatcgccgatgcg
ctgaccaaggaactcgcgggcttcggcccgctggaagatttgctcaacgatcccgcggtg
gaagacatcctgatcaacgggcacacgaatgtctatgtgtcgcgaaacggtatcctggaa
cgcgagaccttgcggttcgccgacactgaacatgtgatgcgcatcgtgcgccgcatcctc
gcgccgctcggtcgccggctggacgaagccaatccgatggtcgacgcgcggctgcccgac
ggcgggcggatcaacgtgatcatcgaaccactcgcgatcgacggtttgtcggtgtcgata
cggaagtttcgcaaggagccgctcacgccagcagatcttgtgaagctgggtaccttcgat
gccggcatggcacaactgctggaaatcgctgtacggtctcgctgcaacatccttgtgagt
ggcggtacgagttcggggaagacctcgctgctcaatgcgctcgcgagcttcattccctca
agagaacgcgtcatcaccatcgaggacacagccgaactatcccttggaaccagccacgtg
gtgcgactcgaaagccggcccggtggttttgatggggctggcgtggtctcaatccgcgac
ctgttgcgcaacagcctgcgcatgcggcccgaccgaatcatcgttggcgaggtgcgcggc
gcagaggtcatcgagatgatgcaagccatgaataccggccatgaaggctccatgggaacc
atccacgcaagctcgccacgcgagtgtctctaccggcttgagatgcttgctgggtttgcg
ggctatcagggaagcgagaccagcctgcgccggcagatcgccaatgcgatcgacttcatt
gttcaaatcgggcgcctgtcgggcggtcaacggcgaattctttcgctcagtgaagtcaca
ggcgtcaacgacaacatagtcgccatgcaggagctgtatcggtacgagcccatcgtctcg
cccgatggcgaggagcgcgatcgctgggtgtcactaggtatcgcgccgcattctccgaag
atcacgcgcttccgccagactctggcgcggccgcagcctggagaacaccgtgcgtga

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