Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_13740
Help
Entry
M634_13740 CDS
T02761
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00300
Lysine biosynthesis
vpf01100
Metabolic pathways
vpf01120
Microbial metabolism in diverse environments
vpf01230
Biosynthesis of amino acids
Module
vpf_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M634_13740
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vpf01002
]
M634_13740
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
M634_13740
Peptidases and inhibitors [BR:
vpf01002
]
Metallo peptidases
Family M20
M634_13740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M42
STELLO
Motif
Other DBs
NCBI-ProteinID:
AGQ91460
LinkDB
All DBs
Position
I:2842395..2843531
Genome browser
AA seq
378 aa
AA seq
DB search
MTDSPVLALAKDLISRQSVTPEDAGCQDLMIERLKALGFEIEVMVFEDTTNFWARRGNEA
PLFAFAGHTDVVPAGKLEQWDTPPFEPTIIDGYLHGRGAADMKGSLAAMVVAVERFIAEH
PDHKGSIGFLITSDEEGPFINGTVRVVEALMERGENIDMCIVGEPSSTEIVGDVVKNGRR
GSITGDLTVKGTQGHVAYPHLANNPVHASLLAIHELATTEWDKGNDYFPPTSFQIPNVSA
GTGASNVIPGEFNVQFNLRFSTELNNDTIVQRVTETLDKHDLNYDLHWTFNGDPFLTDTG
ALLDAVVAAVAEVNNTKPALLTTGGTSDGRFIARMGGQVVELGPVNATIHKVNECVKVDD
LEKLTDMYENTLKHLLAK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacagacagtccagtactggcacttgcaaaagacctgatcagccgccagtccgtaaca
cctgaagatgcgggttgtcaggacctaatgatcgaacgtttaaaagcgctcggttttgaa
attgaagttatggtgtttgaagacaccaccaacttttgggcgcgtcgcggtaacgaagca
ccattgtttgcttttgcaggtcacacagacgttgtacccgcaggcaagctagaacaatgg
gatacaccaccgttcgagccaaccatcatcgatggctaccttcatggtcgtggtgcggcc
gatatgaaaggctctttggcggcgatggtagtggccgttgaacgctttattgccgagcac
ccagatcacaaaggctcgattggctttttgatcacttctgatgaggaaggtcctttcatt
aacggtaccgttcgcgtcgtagaagcactgatggaacgtggtgagaacatcgacatgtgc
atcgttggcgagccttctagtacagagattgtgggtgatgttgtgaaaaatggccgccgt
ggttcaattaccggtgacctaaccgtaaaaggcacacaaggtcatgtggcctaccctcat
ctcgctaataaccctgttcacgcatcgctacttgccatccacgaactggcaacaacagag
tgggataaaggcaatgattacttcccgccaacaagcttccagattcccaatgtatctgcg
ggtacaggggcatctaacgttattcctggcgagttcaacgttcaattcaacctacgtttt
agcaccgaactgaacaatgacactatcgtccagcgcgtaacagaaacactggataagcat
gatctcaactacgatctacattggacattcaacggcgacccgttcttaacggacacaggt
gccctacttgatgccgtggtcgctgccgtagcggaagtgaacaacaccaaacctgcgctg
ctcacaacgggggggacatcagacggacgtttcattgctcgcatgggcggtcaagttgtt
gagcttggacctgtcaatgccacgattcacaaagtgaacgaatgcgtaaaagtggacgat
cttgagaagttgactgacatgtacgaaaacaccttaaaacacctactcgcgaagtaa
DBGET
integrated database retrieval system
