Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_21975
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Entry
M634_21975 CDS
T02761
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf00260
Glycine, serine and threonine metabolism
vpf00630
Glyoxylate and dicarboxylate metabolism
vpf00785
Lipoic acid metabolism
vpf01100
Metabolic pathways
vpf01110
Biosynthesis of secondary metabolites
vpf01200
Carbon metabolism
Module
vpf_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M634_21975
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
M634_21975
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
M634_21975
Enzymes [BR:
vpf01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
M634_21975
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
RNase_H2-Ydr279
Motif
Other DBs
NCBI-ProteinID:
AGQ93436
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Position
II:complement(1263447..1266311)
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AA seq
954 aa
AA seq
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MTELLQSLSTQNEFVGRHNGPKLSDQQKMLEAINAVSLDALISETVPANIRLEQPMTLAE
AKSEADMLAAMKQFAKQNQVKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLESLLNFQQMVIDLTGMEIANASLLDEATAAAEAMTLCKRAGKSKSNVFFVADDVHP
QTIEVVKTRAKFIGFEVLVGSLESLPEQDVFGALVQYPSTTGEVRDLTDIIAKAQANKTL
VTVATDLLASTLLKPAGEMGADVAIGSAQRFGVPMGYGGPHAAFMATRDKHKRTMPGRVI
GVSIDAKGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFYAVYHGAEGLRTIAR
RTHHMTAILAAGLTKGGFELAHNSFFDTITINTGEKTLDLYTKALAADINLRALPGKLGI
SLDETTTVTDVEALFAVFGVKEDVTALSTEIAGNEFAAIPEALRRTSEYLTHPVFNTYHS
ETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGSIHPFAPAEQAAG
YAALAKDLKEKLCEITGYDAFSLQPNSGASGEYAGLIAIQRYHESRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDDEGNIDIDDLAAKIEKHKDNLSSIMITYPSTHGVYEEKV
KEVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHIENGVEGEDFAVSAADFGSASILPISWAYIAMMGEAGLSNATKVAIL
NANYVMERLRPHYPVLYRGKNGRVAHECIIDIRPLKEETGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLAELNRFCDAMISIREEMTKVKNGEWPLENNPLVNAPHTQVDL
SAEEWDRPYSRELGCFPSKATKSWKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattacttcaaagcctcagcacacaaaacgagttcgttggacgccacaacgga
ccaaaactttctgaccaacaaaaaatgttggaagcgatcaacgcagttagcctagacgca
ctgatcagcgaaaccgtaccagcaaacatccgccttgagcagccaatgacgttggcagaa
gcgaaaagcgaagcggacatgttggctgcgatgaaacaattcgcaaaacaaaaccaagtc
aaacgtacattcatcggtcagggttactacaacacgttcacgccaaatgtcattctgcgt
aacgtactagaaaacccaggctggtacaccgcgtacacaccataccaaccagaaatttct
caaggccgtctggaatcactactgaacttccaacaaatggttatcgacctaaccggtatg
gaaatcgcaaacgcgtctttgcttgatgaagcaacggcagcggcagaagcaatgacactt
tgtaagcgcgctggtaagagtaagagcaacgtattctttgtggctgacgacgtgcatcca
caaaccatcgaagtggtaaaaacgcgtgctaaattcatcggttttgaagtgctagttggc
tctttagaatctctaccagagcaagacgtattcggcgcgctggttcaatacccaagcaca
acgggtgaagttcgtgatctaacggacatcatcgcgaaagcacaagcaaacaaaacgctt
gttactgttgcgactgacctacttgcttctaccctattgaaacctgctggagaaatgggc
gcagacgtcgcaatcggttcagctcagcgtttcggcgtaccaatgggttacggcggtcca
cacgcggcatttatggcaactcgtgacaaacataaacgtacaatgccaggccgtgttatc
ggtgtttctatcgatgcaaaaggcaaccaagcacttcgtatggcaatgcagactcgcgag
cagcacatccgccgcgaaaaagcgacatcaaacatctgtaccgctcaagcgttactagca
aacatggcatctttctacgcggtttaccacggtgcagaaggtctacgcaccattgctcgt
cgcacacaccacatgactgccatccttgctgctggcctaacaaaaggcggctttgaactg
gctcataacagcttcttcgacaccatcaccatcaacactggtgagaaaacgctagatctg
tacacaaaagcactcgcagcagacatcaacctacgcgccctacctggcaaactaggcatt
agcttagacgaaacaacaaccgttacagacgtcgaagcattgttcgctgtctttggcgta
aaagaagacgttaccgcactatctacggaaatcgctggtaacgagtttgccgccattcca
gaagcgctacgtcgtacttcagaatacctaacgcacccagtgttcaacacttaccacagt
gaaacacaaatgatgcgttacctaaaacagcttgaaaacaaagacttctcgctaacgcac
ggtatgatcccactaggcagctgtacgatgaagctaaacgcagcggcagagatgatccca
atcacttggcctgagtttggttctatccacccattcgcacccgcagaacaagcggcgggc
tatgcagcgctagcgaaagatctaaaagagaagctttgtgaaatcactggctacgacgca
ttctcactacagccaaactctggcgcatcgggcgagtatgcaggtcttatcgcgattcaa
cgctaccacgaaagccgtggcgaaggtcaccgcaacgtatgtttgatcccaagctctgcg
cacggtactaaccctgcaaccgcatctatggtgtcaatgaaagttgtggttgttaagtgt
gatgacgaaggcaacatcgacatcgacgacctagcagcgaaaatcgagaagcacaaagac
aacctatcaagcatcatgatcacttacccttctacgcacggcgtttacgaagagaaagtg
aaagaagtgtgtgaaatggttcatgccgcaggcggtcaagtatacctagacggcgcgaac
atgaacgcacaggttggcctaacgtcccctggctttatcggctcagacgtttctcaccta
aacctacacaaaaccttctgtatccctcacggtggcggcggtccaggtatgggccctata
ggtgttaaatcccacctagcacctttcctaccaggtcacatcgagaacggtgtagaaggc
gaagacttcgcagtatcagctgcagattttggtagtgcatctatcctacctatctcttgg
gcttacatcgcaatgatgggtgaagcaggcttatccaacgcaaccaaggtcgcgattcta
aacgctaactatgtgatggaacgtctacgccctcactaccctgttctttaccgtggtaaa
aatggccgcgtagcgcacgaatgtattatcgacatccgtccgctgaaagaagaaacaggc
attagcgaagaagatatcgctaagcgtctgatggactacggtttccacgcgccaaccatg
tcgttcccagttgctggcacgctaatggttgaaccaacggaatcggaagacctagcagag
ctaaatcgcttctgtgatgcgatgatttctattcgtgaagaaatgacgaaagtgaaaaac
ggcgaatggccactagagaacaaccctctcgttaatgcgccacacacgcaagttgacctt
tctgctgaagaatgggatcgcccatactcacgcgaacttggctgcttcccttctaaagca
actaaatcttggaaatactggcctacagtaaaccgcgtagataacgtatacggcgaccgt
aacctcatctgctcgtgcccaagtatcgataactacgaagattaa
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