Vibrio parahaemolyticus O1 Kuk FDA_R31: M634_22325
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Entry
M634_22325 CDS
T02761
Name
(GenBank) diguanylate cyclase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpf
Vibrio parahaemolyticus O1:Kuk FDA_R31
Pathway
vpf05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M634_22325
Enzymes [BR:
vpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M634_22325
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Ribosomal_L5e
DUF5547
Motif
Other DBs
NCBI-ProteinID:
AGQ93495
LinkDB
All DBs
Position
II:complement(1344716..1346626)
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AA seq
636 aa
AA seq
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MGRFQTLDYEIPESMQRSWQDIVNLLAQIADVPTTLIMRVHQNHIEVNTSSDTQGNPYKA
GDKEDLGHGLYCEHVIETKSQLVVPDALADEKWSNNPDIKLGMLSYCGLPLFWPNGETFG
TICMLDSKANEYSETYRQLLNTFKDSIEAQLAVVYQQYKLLRLNSELKNRVENRTTDLAQ
LSFSLTQEIDRRKAAERQVNYQKTHDQGTGFLNRAALEAVVEDTLQSLEHGHQSLIVINV
GFSNARSIQTRYGFEAFDEILKEFRKRLGTNDSNYFITGRPSSNDLVLLLWGEDADSKLH
NLLDKITNISVGNFYINDTEVHLHSYVGVVQAHRSSSAKQLLQNACYAMLLCKESGEAYS
YFCESHTHELNNHNQLESYLLQAVRNDDLMLYFQPKVNPHTHKWIGAEALLRWRHPVLGD
VSNEALIHMAEQNGLIFEVGSFVLRTAIDKAKQWSELFDNFKVAVNVSPIQLQNVNFAEQ
VEHLLEAFHLPARFLELEVTESALIADEVVARTTLKKLNKLGVTLSLDDFGTGYASFSYL
KKYPFDAIKIDKSFVQQMEKSDDDRAIICSIIHIAKKLELQVVIEGIESPQQEQFLIGEG
CDIGQGFLYGKPMPCNEFEQSLFNQRQIGGQYAYSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggggagatttcaaacactagattatgagattcctgaatccatgcagcgaagctggcag
gatatcgtcaatctcctcgcacagattgcagacgtgccaaccacgcttatcatgcgagtg
catcaaaaccacatcgaagtaaacacctcaagcgacactcaaggtaatccatataaagct
ggtgacaaagaagatcttggacatggtttgtactgtgaacatgtcattgaaaccaaaagc
caactggttgttcccgatgcccttgccgatgaaaaatggtcgaataatccggacatcaaa
cttggtatgctctcctattgtggtttgccgttgttttggccaaatggcgaaacgtttgga
accatttgtatgttggactctaaagccaatgagtacagcgaaacttaccggcaattgctc
aatacgttcaaggactcaatagaagctcaacttgctgttgtctaccaacaatacaaactg
ttgagacttaacagcgaacttaaaaatcgcgtagaaaaccgaaccactgacctcgcccaa
ctcagcttttcactcactcaagaaattgaccgccgcaaagccgctgaaagacaagttaac
taccagaaaacccatgaccaaggtaccggatttcttaatcgcgccgctctggaagctgtc
gttgaagatacgcttcaatccttagaacacgggcatcagtctttaattgttataaatgtg
ggctttagtaatgcgcgtagtatacaaactcgatacggctttgaagcgtttgatgagatc
ctcaaagaatttcgtaagcgccttggaacgaacgattcaaactacttcattactggtcgc
ccaagttcaaacgacttagtgcttttgttatggggagaagatgctgattcgaaactgcat
aatctgctcgataaaatcaccaatatcagcgtggggaacttctacatcaacgacacagaa
gtgcatttgcactcctacgttggcgtagttcaggctcatcgttcgagcagtgctaaacag
cttctacaaaatgcttgttacgcgatgttgctatgtaaagagtcgggtgaagcttacagt
tacttctgtgagagccacacgcatgagttgaacaaccataatcagctcgaaagttatctg
ctccaagcggtacgtaatgacgatttgatgttgtatttccaaccgaaagtgaaccctcat
acgcacaaatggataggtgcagaagcactattacgctggcgtcaccccgttttaggcgat
gtatctaacgaagcgctcatccacatggctgagcaaaatgggctcatatttgaagttggc
tcatttgttctgcgtactgctatcgacaaagccaaacagtggtctgagttattcgataat
ttcaaagttgcggtaaatgtctctcctattcaactgcagaacgtgaattttgccgagcaa
gtggaacaccttctcgaagcgttccaccttccggcacgttttcttgagttagaagtgacg
gaaagtgcgttaattgctgatgaagtggtcgctcgaacaacccttaaaaaattgaacaaa
cttggcgtgacattgtcacttgatgattttggtacgggctacgcctctttcagttatttg
aagaagtatccttttgacgccataaaaatcgacaagagctttgttcagcaaatggaaaaa
tccgacgatgaccgcgcaatcatttgttccatcatccatattgcgaaaaaacttgagctg
caagtggtcattgaagggattgaatcgccacaacaagagcagtttttgattggcgaagga
tgcgatatcggacaaggctttttgtacggaaaaccgatgccttgtaacgagttcgaacaa
agtttgtttaatcagcgtcaaattggtggccaatacgcctattcttcctaa
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