Vibrio parahaemolyticus UCM-V493: VPUCM_0211
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Entry
VPUCM_0211 CDS
T03116
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00540
Lipopolysaccharide biosynthesis
vph01100
Metabolic pathways
vph01250
Biosynthesis of nucleotide sugars
Module
vph_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VPUCM_0211
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vph01005
]
VPUCM_0211
Enzymes [BR:
vph01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VPUCM_0211
Lipopolysaccharide biosynthesis proteins [BR:
vph01005
]
Core region
VPUCM_0211
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
KR
Phage_T7_Capsid
Motif
Other DBs
NCBI-ProteinID:
AHI98169
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Position
1:complement(228761..229702)
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AA seq
313 aa
AA seq
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MIIVTGGAGMIGSNIVKALNKVGLNDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSSTTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GDTDTFVEECEYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQLNAGDNPKLFAGSESFKRDFVYVGDVCKVNLWFLENGVSGIFNC
GTGRAESFEEVAKAVIAHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRAAGCDVKFKTV
AEGVAEYLTIQNG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggcgctggtatgatcggcagcaacattgtgaaagcgctaaac
aaagtgggtctcaacgatattttggttgtcgacaaccttaaaaatggtaaaaagtttaaa
aacttggttgacctagacatcactgattacatggaccgcgatgatttccttacccaaatc
atggctggtgatgacttcggccctattgaagcaattttccacgaaggtgcttgctcctca
accactgagtgggacggcaagtacatgatgctaaacaactatgagtactcaaaagagctt
ctacattactgtttagatcgtgagataccattcctatatgcctcttccgcagccacttac
ggcgatacagatactttcgttgaagaatgcgaatacgaaggcgcactgaatgtatacggt
tactcgaagcagcagtttgataactacgttcgtcgtctatggcaagacgcggaagaacat
ggtgaaactctttctcaaatcaccggcttccgttacttcaacgtatatggcccacgtgaa
gatcacaaaggcagcatggcatctgttgcgttccatctgaacaaccagctaaacgcaggt
gacaatccaaaactgtttgcaggtagcgagtcttttaagcgtgatttcgtttacgttggt
gatgtatgtaaagtaaacctgtggttccttgaaaatggtgtttctggtatcttcaactgt
ggtactggtcgtgcagaatcttttgaagaagtagcaaaagcggtcattgcccatcatgga
aaaggcgagattgaaactattcctttcccagagcatctaaaaggtgcctatcaagagttc
acgcaagcggatcttaccaaactacgcgcagcaggttgcgatgttaagttcaaaacggtc
gccgaaggtgttgctgaatacctgacgattcaaaacggttaa
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