Vibrio parahaemolyticus UCM-V493: VPUCM_20062
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Entry
VPUCM_20062 CDS
T03116
Name
(GenBank) Transcriptional regulator CdgA
KO
K20956
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VPUCM_20062
Enzymes [BR:
vph01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
VPUCM_20062
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AHJ01183
LinkDB
All DBs
Position
2:complement(59426..60517)
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AA seq
363 aa
AA seq
DB search
MKLSEAYPIKQKNYSTTSKMLLLVFATSLLLANVILLQQTRVLAQSFTDEQKQATWFLFQ
LSKELSELVSEARRLDENVLKIEGAELQYELAWSRFDLLINSKDVYTFFSRNHIQQYFLQ
LFNEFKELEPLLVEAKTGDSQAAAQFYRATQTLYLNLVEFVNQNFRLTSQVYETQKDESQ
RLMKAQYMLFATFVLSILSLTYFFYRESHFHRKLALSDPLTGLGNRNALFVTLRNNTRNR
TAFSLCLLDLNGFKNVNDTYGHQAGDTVLCEIAKRLKDMNIDSFSAYRMGGDEFAVVIES
SDVDAEEAKKHIHSVFDTPVLNANNVSSLSTSIGVAHYPSDSDNVDFLISIADKRMYKMK
FQR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatcagaagcttacccaattaaacaaaaaaattattcgacgaccagcaaaatg
ctccttttggtttttgccacttctttattgctcgcaaatgtcatattgctccaacaaact
cgggtcttagcgcaaagttttactgatgagcaaaaacaagcgacatggtttttattccag
ttatcgaaagaactttctgagctcgtcagtgaagcacgtcgactggacgaaaatgtttta
aaaatagaaggtgcagaacttcagtatgagcttgcttggagccgttttgatttattaata
aatagtaaagacgtctacacctttttttctcgcaatcacattcaacaatattttttgcaa
ctgtttaatgagtttaaagagttagaaccactgttggtggaagccaaaaccggcgacagc
caagcggcagctcagttttatcgcgccactcaaacgctgtatttaaacttggtggagttt
gtgaaccagaactttcgcttaaccagccaagtgtacgagacacaaaaagatgaaagccaa
cgattgatgaaagcgcaatacatgctgtttgccactttcgtcttgtcgattttgtcgctg
acttacttcttctacagagaatcgcacttccatcgtaagctggcgttgagtgaccccctt
actggccttggcaaccgaaatgctctgtttgtcacgttgagaaataacacccgcaaccga
acggctttttctttgtgtctgttggatctaaacgggttcaaaaacgtgaatgacacgtac
ggccaccaagctggtgatacggtgttgtgcgaaattgccaagcgattgaaagacatgaat
attgatagcttcagtgcctatcggatgggtggagacgagtttgctgtcgtaattgagtcc
tcagacgtcgatgcagaggaggcgaaaaaacacatccattccgtgtttgatactccggtt
ctaaacgcgaacaacgtatcgtcactgtcgaccagtattggcgtcgcacactacccaagt
gacagcgataatgttgactttcttatcagcatagcggataagcgcatgtacaaaatgaaa
tttcaacgttaa
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