Vibrio parahaemolyticus UCM-V493: VPUCM_2284
Help
Entry
VPUCM_2284 CDS
T03116
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_2284
Enzymes [BR:
vph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
VPUCM_2284
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VPUCM_2284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_8
NAD_binding_9
FAD_binding_2
Pyr_redox_3
Pyr_redox
F420_oxidored
Nmad5
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AHJ00243
LinkDB
All DBs
Position
1:2464921..2466939
Genome browser
AA seq
672 aa
AA seq
DB search
MTSIKNAELGWNEAGTPVSDQFDDVYFSNVNGLEETRYVFLKQNHLPERWQEFDQRRFVI
GETGFGTGLNFLAVWQWFNEFRRNHPDAALKELHFISFEKYPLSLADLKKAHEAWPELAE
YAEKLQKHYPAAVPECHRIVLEDGAITLDLWFGDIKDCMPQVPYNEQGLIDAWFLDGFAP
SKNPEMWNQNLFNNMAKLAKQDCTVATFTAAGFVRRGLNEAGFAMKKVKGFGTKREMIVG
SMEQREKQSNHLAWFNRTASSNLDSIAIVGGGIASAALAKTLVRRGQNVTLYCKDTQPAE
GASGNRQGAVYPLLNGPHTGVSRVFAPAFLFARQFVEQAAQEIDFDHDWCGVTQLMWDDK
STDKLEKMLEGNFTPELIRKLSAEETAETIGLSIDMASVHYPMGGWLCPAELTRGLITQL
EKTDLFEAKFEHQVESLTWDEARQLWTLKANGQNFEHSTVVVANGNEFQTLSQTEALPMG
QVKGQVSHAPATKTLSKLKTVLCYDGYMTPVNPNNQHLCIGASYDRSHLDYEFDENAQRE
NVEKLVKCIPNQEWTKEVDTSGNLSRQGIRCVSRDHLPFVGNVGDFDTIKTQYADLQNQP
EEEVEAIHQFPNLFCFLGLGSRGLSSAPLLAEVLASQICGDPLPLPVDVLTELHPSRMWV
RKLRKGKAITEL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaattaaaaatgctgaacttggttggaacgaagctggcacgccggtttctgac
caatttgatgatgtttacttttctaacgtaaacggtcttgaagagacacgctacgttttc
ctcaaacaaaatcatctcccagaaagatggcaggaatttgaccaaagacgctttgttatt
ggtgaaaccggatttggcacgggactgaactttcttgctgtatggcaatggtttaatgaa
tttcgtcgcaaccacccagatgcagcgctaaaagagctgcacttcattagttttgaaaaa
tacccactaagcctagcggatttgaaaaaagcacacgaagcgtggccggagttggctgag
tatgcagaaaagctgcaaaagcactaccctgctgccgtacctgagtgtcaccgaattgtg
cttgaagatggcgcaattacactcgacctttggtttggcgacatcaaagactgcatgccg
caagtcccatacaacgaacaaggtttgattgacgcttggtttttagatggattcgcacca
agtaaaaacccagaaatgtggaaccaaaatctgttcaacaacatggctaagttagccaag
caagactgtacagttgccacttttaccgcggcgggctttgtgcgtcgaggattgaacgaa
gctggctttgcaatgaaaaaagtcaaaggctttggcaccaagcgtgaaatgatcgtaggt
tcgatggaacaacgcgaaaagcaatcgaaccatcttgcgtggttcaatcgcacggcgtcc
agcaatcttgattcgattgccatagtcggaggtggtattgccagcgcggcgttagcgaaa
acgttggttcgtcgtggccaaaacgtcacgctttactgcaaagacactcaaccagccgaa
ggggcatctggcaaccgtcaaggtgccgtttatcctctgcttaatggcccgcatacaggt
gtatctcgtgtgtttgcgccagcatttttgttcgcacgtcaatttgtcgagcaagccgcg
caagaaatcgattttgaccatgattggtgtggtgtaactcaattgatgtgggatgacaaa
tccacagacaaactagagaaaatgctggagggaaacttcactccagagctcattcgtaaa
ttgtctgcggaagaaacggcggagacaatcggcttatccattgatatggcatcggttcat
tacccaatgggcggttggttgtgccctgcggaattaactcgcgggctgattactcaacta
gaaaaaaccgatctttttgaagcgaagttcgagcatcaagtcgagtcactaacttgggac
gaagcgcgtcagctttggacattaaaggcgaacggccagaacttcgaacattcaaccgtt
gtagttgctaacggcaacgagttccaaacactaagccaaactgaagccttaccgatggga
caagtaaaaggacaagtgagtcacgcgccagcaacgaaaaccctatctaaactcaaaact
gtactgtgttacgacggttacatgacgcctgttaacccaaataaccaacacctttgcatt
ggtgccagttacgatcgcagtcatttagactatgagtttgatgaaaacgcacaacgagag
aacgtagaaaagttggtcaaatgcattccaaatcaggaatggaccaaagaagtggataca
tcgggcaatttgtcacgccaaggtattcgttgcgtgagtcgagaccatctgccgtttgtt
gggaacgtgggtgatttcgacacaatcaaaacgcaatatgcagatttgcaaaatcaacca
gaagaagaggttgaagcgattcaccaattccctaaccttttctgctttttaggtttaggc
tctcgaggtctaagctctgcgcctctgttggcagaagtgttggcctcgcaaatctgtggg
gacccgctgccactccctgtcgatgtgctgacagaacttcacccaagccgtatgtgggta
cgtaaattacgcaaaggcaaagcgattaccgagctttaa
DBGET
integrated database retrieval system
