Vibrio parahaemolyticus UCM-V493: VPUCM_2531
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Entry
VPUCM_2531 CDS
T03116
Name
(GenBank) tRNA S(4)U 4-thiouridine synthase (former ThiI)
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vph
Vibrio parahaemolyticus UCM-V493
Pathway
vph00730
Thiamine metabolism
vph01100
Metabolic pathways
vph01240
Biosynthesis of cofactors
vph04122
Sulfur relay system
Module
vph_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vph00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VPUCM_2531
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
VPUCM_2531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vph03016
]
VPUCM_2531
Enzymes [BR:
vph01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
VPUCM_2531
Transfer RNA biogenesis [BR:
vph03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
VPUCM_2531
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Transcrip_reg
Dak2
Motif
Other DBs
NCBI-ProteinID:
AHJ00490
LinkDB
All DBs
Position
1:complement(2725097..2726494)
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AA seq
465 aa
AA seq
DB search
MRKRFTKILECNIRNIVKSRTESVAVFNRRDHIEVTSESNEYHAEVLEILTHTPGIHHVL
EVKQSEFKDLHDIYEQVLELSRPLIENKTFVVRAKRRGKHDFTSIELERYVGGGLNQAVE
SARVKLHNPDVTVKVEVSGDKLNQVLARYKGLGGFPLGTQEDVLSLISGGFDSGVSSYLH
IKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFISVDFEPVVAEILEKVDD
GQMGVILKRMFMRAAGMIAEKFKIEALVTGEALGQVSSQTLTNLRHIDNVTDTLILRPLI
NWDKEDIINLAREIGTEDFAKTMPEYCGVISKKPTVKAVKEKLEAEEAKFDFSILEKVVY
EARQMDIRDIAKESEQAAPEVEQVQAVEEHAVVLDIRSPDEEDDNPLEIAGVDVKHIPFY
KLGTQFGDLDQSKTYLLYCDRGVMSRLQALYLQEQGFNNVKVYRP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtaagcgcttcacaaagattttagagtgcaacattcgtaatatcgtcaagagccgc
acggaatctgtcgcagtatttaaccgtcgtgatcacattgaagtgacctctgagagcaac
gaataccacgctgaagttttagaaatcctgactcacacgccaggcattcatcacgttcta
gaagtgaagcaatcagagtttaaagacctgcacgacatctacgagcaggtgctggaactt
agccgtccgcttattgaaaacaaaacgtttgtggttcgtgcaaaacgccgtggtaagcat
gacttcacgtctatcgagcttgaacgttacgttggtggtggtctaaaccaagcagtagaa
agcgcacgcgttaaattgcacaaccctgatgtgacggtaaaagttgaagtgtcgggtgac
aaacttaaccaagtgttggcacgttacaaaggtctaggtggcttccctctaggtactcaa
gaagacgtactaagcctgatctcaggtggtttcgactctggtgtatcaagctacttacac
atcaaacgtggctctaaagttcactactgtttctttaacctaggtggcccagctcatgaa
atcggtgttaagcaggtttctcactacctatggaacaaatacggctcatcagcgaaagtg
cgtttcatctctgttgatttcgaacctgtggttgctgaaattcttgagaaagtagatgac
ggtcaaatgggcgtcatcttgaagcgtatgttcatgcgcgctgctggcatgattgctgag
aagtttaagattgaagcgttggtaacgggtgaagctcttggccaggtatctagccaaacg
ctaacgaaccttcgtcacatcgataatgttacggatacgctgattctgcgtcctcttatc
aactgggataaagaagacatcatcaacttagctcgtgaaatcggtacagaagacttcgcg
aaaaccatgcctgagtactgtggcgtgatctctaagaaaccaacagtaaaagcggtgaaa
gagaagctagaagcagaagaagcgaagtttgacttcagcattctagaaaaagtggtttac
gaagcgcgtcaaatggacattcgtgatatcgcaaaagaatctgagcaagcggcacctgaa
gtcgagcaagtacaagcggtagaagaacacgcagtagtattggatattcgtagccctgat
gaggaagacgataacccactagaaatcgctggtgtggatgtgaaacacattccattctac
aagctgggtacgcagttcggtgacctagaccagtcgaaaacttacctactgtactgtgac
cgtggcgtcatgagccgtctgcaagcgctttacttgcaagagcagggctttaacaacgta
aaagtttaccgtccatag
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