Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_03805
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Entry
M636_03805 CDS
T02760
Name
(GenBank) diguanylate cyclase
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
M636_03805
Enzymes [BR:
vpk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
M636_03805
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Ribosomal_L5e
DUF5547
Motif
Other DBs
NCBI-ProteinID:
AGQ96462
LinkDB
All DBs
Position
II:complement(841463..843373)
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AA seq
636 aa
AA seq
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MGRFQTLDYEIPESMQRSWQDIVNLLAQIADVPTTLIMRVHQNHIEVNTSSDTQGNPYKA
GDKEDLGHGLYCEHVIETKSQLVVPDALADEKWSNNPDIKLGMLSYCGLPLFWPNGETFG
TICMLDSKANEYSETYRQLLNTFKDSIEAQLAVVYQQYKLLRLNSELKNRVENRTTDLAQ
LSFSLTQEIDRRKAAERQVNYQKTHDQGTGFLNRAALEAVVEDTLQSLEHGHQSLIVINV
GFSNARSIQTRYGFEAFDEILKEFRKRLGTNDSNYFITGRPSSNDLVLLLWGEDADSKLH
NLLDKITNISVGNFYINDTEVHLHSYVGVVQAHRSSSAKQLLQNACYAMLLCKESGEAYS
YFCESHTHELNNHNQLESYLLQAVRNDDLMLYFQPKVNPHTHKWIGAEALLRWRHPVLGD
VSNEALIHMAEQNGLIFEVGSFVLRTAIDKAKQWSELFDNFKVAVNVSPIQLQNVNFAEQ
VEHLLEAFHLPARFLELEVTESALIADEVVARTTLKKLNKLGVTLSLDDFGTGYASFSYL
KKYPFDAIKIDKSFVQQMEKSDDDRAIICSIIHIAKKLELQVVIEGIESPQQEQFLIGEG
CDIGQGFLYGKPMPCNEFEQSLFNQRQIGGQYAYSS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggggagatttcaaacactagattatgagattcctgaatccatgcagcgaagctggcag
gatattgtcaatctcctcgcacagattgcagacgtgccaaccacgcttatcatgcgagtg
catcaaaaccacatcgaagtaaacacctcaagcgacactcaaggtaatccatataaagct
ggcgacaaagaagatcttggacatggtttgtactgtgaacatgtcattgaaaccaaaagc
caactggttgtcccagatgcccttgccgatgaaaaatggtcgaataacccggacatcaaa
cttggtatgctctcctattgtggtttgccgttgttttggccaaatggtgaaacgtttgga
accatttgtatgttggactccaaagccaatgagtacagcgaaacttaccggcaattactc
aacacgttcaaggactcgatagaagctcaacttgctgttgtctaccagcaatacaaactg
ttgagacttaacagcgaacttaaaaatcgcgtagaaaaccgaaccactgacctcgcccaa
ctcagcttttcactcactcaagaaattgaccgccgcaaagccgctgaaagacaagttaac
taccagaaaacccatgaccaaggtaccggatttcttaatcgcgccgctctggaagctgtc
gttgaagatacgcttcaatccctagaacacgggcatcagtctttaattgttataaatgtg
ggctttagtaatgcgcgtagtatacaaactcgatacggctttgaagcgtttgatgagatc
ctcaaagaatttcgtaagcgccttggaacgaacgattcaaactacttcattactggtcgc
ccaagttcaaacgacttagtgcttttgttatggggagaagatgctgattcgaaactgcat
aatctgctcgataaaatcactaatatcagcgtggggaacttctacatcaacgacacagaa
gtgcacttgcactcctacgttggcgtagttcaggctcatcgctcgagcagtgctaaacag
cttctacaaaatgcttgttacgcgatgttgctatgtaaagagtcgggtgaagcttacagt
tacttttgtgagagccacacgcatgagttgaacaaccataatcagctcgaaagttacctg
ctccaagcggtacgtaatgacgatttgatgttgtatttccaaccgaaagtgaaccctcat
acgcacaaatggataggtgcagaagcactattacgctggcgtcaccccgttttaggcgat
gtatctaacgaagcgctcatccacatggctgagcaaaatgggctcatatttgaagttggc
tcatttgttttgcgtactgctatcgacaaagccaaacagtggtctgagttattcgataat
ttcaaagttgcggtaaatgtctctcctattcaactgcagaacgtgaattttgccgagcaa
gttgaacaccttctcgaagcgttccaccttccggcacgttttcttgagttagaagtgacg
gaaagtgcgttaattgctgatgaagtggtcgcacgaacaacccttaaaaaactgaataaa
cttggtgtgacattgtcactcgacgattttggtacgggctacgcctctttcagttatttg
aagaagtacccttttgatgccatcaaaatcgacaagagttttgttcagcaaatggaaaaa
tccgacgatgaccgcgcaatcatttgttccatcatccatattgcgaaaaaacttgagctg
caagtggtcattgaagggattgaatcgccacaacaagagcagtttttgattggcgaagga
tgcgatatcggacaaggctttttgtacggaaaaccgatgccttgtaacgagttcgaacaa
agtttgtttaatcagcgtcaaattggtggccaatacgcctattcttcctaa
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