Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_10885
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Entry
M636_10885 CDS
T02760
Symbol
fadJ
Name
(GenBank) fatty-acid oxidation protein subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00071
Fatty acid degradation
vpk00280
Valine, leucine and isoleucine degradation
vpk00310
Lysine degradation
vpk00362
Benzoate degradation
vpk00380
Tryptophan metabolism
vpk00410
beta-Alanine metabolism
vpk00640
Propanoate metabolism
vpk00650
Butanoate metabolism
vpk00907
Pinene, camphor and geraniol degradation
vpk00930
Caprolactam degradation
vpk01100
Metabolic pathways
vpk01110
Biosynthesis of secondary metabolites
vpk01120
Microbial metabolism in diverse environments
vpk01200
Carbon metabolism
vpk01212
Fatty acid metabolism
Module
vpk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
M636_10885 (fadJ)
00650 Butanoate metabolism
M636_10885 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
M636_10885 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
M636_10885 (fadJ)
00310 Lysine degradation
M636_10885 (fadJ)
00380 Tryptophan metabolism
M636_10885 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
M636_10885 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
M636_10885 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
M636_10885 (fadJ)
00930 Caprolactam degradation
M636_10885 (fadJ)
Enzymes [BR:
vpk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
M636_10885 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
M636_10885 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
M636_10885 (fadJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LEM
Motif
Other DBs
NCBI-ProteinID:
AGQ97920
LinkDB
All DBs
Position
I:566342..568453
Genome browser
AA seq
703 aa
AA seq
DB search
MSEQKAFSLNVDEQNIAWLAIDVPNEKMNTLQAAFADEMKEIFAQLKDTSGIKGMIIHSL
KPDNFVAGADVRMLEACTTANEAQALAKQGQELFQQLSDLPYPVVAAIHGPCLGGGLELA
LACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLPRLIGLLPSLDLILTGKQLRAKKAK
KLGVVDACVPDTILLDVAKQFIDKGKNKGKKKQSTKEKLMSGSGLGRKLVFEQAAKKTNQ
KTRGNYPATVAILEVIQHGLEKGFAQGQELEAKRFGELVMSSESKALRSIFFATTEMKKE
HGTDAQPAAVKKVGVLGGGLMGAGISHVTVAKAKVPVRIKDVSNDGVLNALNYNYKLFEK
QRKRRILSKADLQAKMLQLSGGVDFTSYNHIDVVIEAVFEDLDLKQQMVADIEANAKSET
IFATNTSSLPIHKIAEKAERPENIVGLHYFSPVEKMPLVEVIPHETTSDETISTVVALAK
KQGKTPIVVKDKAGFYVNRILAPYMNEAAHILLANEPIEKLDGALLDFGFPVGPITLLDE
VGVDIGAKIMPILVNELGERFKGPDVFDILLNDGRKGRKSGKGFYTYKGKKKEVDKSIYK
ILKLTPESKLSDNDIALRCVLPMLNEAVRCLDDGIIRSPRDGDIGAIFGIGFPPFLGGPF
RYMDQFGLKELVEKMNEFASKYGDRYAPCDGLLTRAGEGRTFY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaaaagcatttagtcttaacgttgatgagcagaacattgcatggttagcg
atcgacgtaccgaatgaaaagatgaacacgctacaggcagcttttgctgatgaaatgaaa
gaaatttttgctcagctaaaagacaccagtggcatcaaagggatgatcattcactcctta
aaaccggataattttgtggcaggtgccgatgttcgtatgttggaggcatgtaccacagcg
aatgaagcacaagcattggcaaaacaaggtcaagagttgttccaacaactgtctgactta
ccttaccctgtagttgcggctattcatggcccatgtttgggcggcggtttagagcttgcg
cttgcatgtgattaccgtgtttgtacggattccgataagacacgcttaggcttaccagaa
gttcaactcggtctattaccgggctctggcggtactcagcgtttgccacgtttgattggt
ctgttaccgtcattggacttgatcctgacgggtaaacagcttcgcgcgaagaaagccaaa
aaactgggcgttgtggacgcgtgtgtccctgacaccattttgctcgacgtagcaaaacag
tttatcgacaaaggcaagaacaagggcaagaaaaagcaatcgacgaaagagaagttgatg
tcgggcagtgggttaggtcgtaagcttgttttcgaacaagctgcgaagaaaaccaaccag
aagacccgtggcaactatccagcaacggtcgcgattcttgaagtgattcaacacggtctg
gaaaaaggctttgcacaagggcaagagctagaagcgaaacgatttggtgagcttgtgatg
agctccgaatcgaaggcattgcgctctatcttcttcgcgacaactgaaatgaagaaggaa
cacggcacggatgcacagcctgcagcggtgaaaaaagtgggtgttcttggtggcggctta
atgggcgctgggatcagtcatgtaacggtagcaaaagcaaaagtgcctgttcgaatcaaa
gatgtgagcaatgacggtgtgttgaatgcacttaactacaactacaagttgtttgagaag
cagcgcaaacgtcgcatcctgtcgaaagccgatttacaggcgaagatgttgcaactgtca
ggtggcgtagactttacaagttacaaccacattgatgttgtgatcgaagcggttttcgaa
gacttggatctaaaacaacagatggttgcggacattgaagcaaacgcaaaatctgaaact
atttttgctacgaacacgtcttcgttaccaatccacaagattgcagaaaaggcagagcga
ccagaaaacatcgtcggtttgcactactttagcccagtagaaaaaatgccgctggtggaa
gtgattccgcatgaaacaacgtctgatgaaaccatttcgacagttgtcgcattggctaag
aaacagggtaaaaccccaatcgttgtgaaggacaaagctggcttttacgtaaaccgcatt
cttgcgccttacatgaatgaagctgcgcatatcttgctggcaaatgagccgattgagaag
ttagatggtgcgttgttggatttcggcttccctgttgggccaatcacgttacttgatgaa
gttggtgttgatattggcgcgaagatcatgccgattctggtcaatgagttgggcgagcga
ttcaaaggtcctgatgtattcgatatcttattgaatgacggtcgcaaaggacgcaagagc
gggaaaggtttctacacttacaaaggtaagaagaaagaagtcgataaatccatctacaag
atactcaaactgacgccagaatcgaagctcagcgataacgatattgcgttgcgctgtgta
ctgccaatgcttaatgaagcagtacgatgcttggacgacggtattattcgctctccgcgc
gatggcgatattggtgcgatttttggtattggcttccctccattccttggcgggccattc
cgttatatggatcaattcggtttgaaagaactggttgagaaaatgaacgaatttgcatcg
aaatatggcgatcgttatgcgccatgcgacggactgctgactagagcgggtgaaggtcgt
accttctactaa
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