Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_20695
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Entry
M636_20695 CDS
T02760
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-mannoheptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00540
Lipopolysaccharide biosynthesis
vpk01100
Metabolic pathways
vpk01250
Biosynthesis of nucleotide sugars
Module
vpk_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
M636_20695 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vpk01005
]
M636_20695 (rfaD)
Enzymes [BR:
vpk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
M636_20695 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
vpk01005
]
Core region
M636_20695 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
ThiF
adh_short
KR
Phage_T7_Capsid
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AGQ99408
LinkDB
All DBs
Position
I:2683844..2684785
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AA seq
313 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKALNEAGINDILVVDNLKNGKKFKNLVDLDITDYMDRDDFLTQI
MAGDDFGPIEAIFHEGACSATTEWDGKYMMLNNYEYSKELLHYCLDREIPFLYASSAATY
GDTDTFVEEREYEGALNVYGYSKQQFDNYVRRLWQDAEEHGETLSQITGFRYFNVYGPRE
DHKGSMASVAFHLNNQLNAGDNPKLFAGSESFKRDFVYVGDVCKVNLWFLENGVSGIFNC
GTGRAESFEEVAKAVIAHHGKGEIETIPFPEHLKGAYQEFTQADLTKLRAAGCDVKFKTV
AEGVAEYLTIQNG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaactggtggcgctggcatgatcggcagcaacattgttaaagcactaaac
gaagctggtattaacgatatcttggttgtcgacaacctaaaaaatggcaaaaagtttaag
aacttagttgatctggacatcacagattacatggatcgtgacgactttctgacccaaatt
atggcgggcgatgattttggtccgattgaggcaattttccacgaaggcgcttgctctgca
acgacagagtgggatggtaaatacatgatgctaaacaattacgagtactctaaagagctg
cttcattactgtttagatcgtgaaattccattcctatacgcctcttccgcagccacttac
ggcgatacagatactttcgttgaagaacgcgaatacgaaggcgcactgaatgtatacggt
tactcgaaacagcagtttgataactacgttcgtcgtctatggcaagacgctgaagaacat
ggtgagaccctttctcaaatcaccggcttccgttacttcaacgtatatggcccacgtgaa
gatcacaaaggcagcatggcatctgttgcattccatctgaacaaccaactaaacgcaggt
gacaatccaaaactgtttgcaggtagcgagtcttttaagcgtgatttcgtttacgttggt
gatgtatgtaaagtaaacctgtggttccttgaaaatggtgtttctggtatcttcaactgt
ggtactggtcgtgcagaatcttttgaagaagtagcaaaagcggtcattgcccatcatgga
aaaggcgagattgaaactattcctttcccagagcatctaaaaggtgcctatcaagagttc
acgcaagcggatcttaccaaactacgcgcagcaggttgcgatgttaagttcaaaacggtc
gccgaaggtgttgctgaatacctgacgattcaaaacggttaa
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