Vibrio parahaemolyticus O1 K33 CDC_K4557: M636_22935
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Entry
M636_22935 CDS
T02760
Name
(GenBank) lysine decarboxylase CadA
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
vpk
Vibrio parahaemolyticus O1:K33 CDC_K4557
Pathway
vpk00310
Lysine degradation
vpk01100
Metabolic pathways
vpk01110
Biosynthesis of secondary metabolites
vpk01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vpk00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
M636_22935
Enzymes [BR:
vpk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
M636_22935
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AGQ99735
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All DBs
Position
I:3140880..3143015
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AA seq
711 aa
AA seq
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MNIFAILNHMGVFFKEEPVRQLHAALEKAGYEVVYPVDDKDLIKMIEMNPRICGVLFDWD
KYSLELCERISQINEKLPVHAFANEQSTLDISLTDLRLNVSFFEYALGMADDIAIKINQA
TEAYKDAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQKSPAGSIFYDFYGPNTFKADV
SISMPELGSLLDHSGPHKDAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQSEFSRDVIAEKVAKTPGATAPSY
AVVTNSTYDGLLYNTQFIKESLDCKHIHFDSAWVPYTNFNPIYEGKCGMSGEAMPGKVFY
ETQSTHKLLAAFSQASMIHVKGDFDKESFNEAFMMHTSTSPQYGIVASTETAAAMMRGNT
GKKLMQDSIDRAIRFRKEIKRLEAESDSWFFDVWQPENIDTTECWKLDPSDTWHGFKNMD
DNHMYLDPIKVTLLTPGMNKEGELEESGIPASLVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKSKAMQLLRGLTEFKRGYDLNLTIKSFLPSLYNEDPSFYEGMRVQELAQAIHDLTKKY
NLPELMYKAFDVLPEMKVTPHAAWQEELRGNVEEIKLEEMVGRVSANMILPYPPGVPLVL
PGEMVTQESRPVLDFLEMLCEIGAHYPGFETDIHGLYQQKDGSYTVKVLKN
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttcgctatcttgaaccacatgggtgtgttctttaaagaagagccagttcgt
caacttcacgctgctcttgagaaagcgggctacgaagtggtttacccagtagatgataaa
gacttgatcaaaatgattgagatgaacccacgcatttgcggtgtgctgttcgactgggat
aaatactcactagagctatgtgaacgtattagccagatcaacgaaaaactgcctgttcac
gcatttgctaacgaacagtctactctcgatatttcactaacagacctacgtctaaacgtg
agcttcttcgagtacgctttaggtatggctgacgacatcgctatcaaaatcaaccaagcg
acagaggcatacaaagatgccatcatgcctccattcactaaagcgctattcaaatacgta
gaagaaggtaaatacaccttctgtactccaggtcacatgggtggtactgcattccagaaa
agccctgctggtagcatcttctacgatttttatggtccaaatacatttaaagcggacgta
tcaatctcaatgcctgagttaggttctctactagatcactcaggtccacataaagatgca
gaagaatacatcgcacgtacattcaatgcagacagctcttacatcgtaacgaacggtacg
tctacatcgaacaaaattgttggcatgtactcagcgcctgcgggcagcacagtgctgatt
gaccgtaactgtcacaaatctctgactcacctaatgatgatgagcgacgtgacaccaatc
tacttccgcccaactcgtaacgcatacggcatccttggtggtattccacaaagcgaattc
agccgcgatgtaatcgcagagaaagttgcgaaaacaccaggtgcaacagcgccaagttac
gcagtagtgactaactcaacttacgatggtctgttgtacaacacacaattcatcaaagag
tcgctagactgtaaacacatccacttcgacagtgcttgggttccttacactaacttcaac
ccaatttacgaaggtaaatgtggtatgagtggtgaagcgatgccaggcaaagtgttctac
gaaacacaatcaacacacaaactgttggcagcgttctcacaagcttcaatgattcacgtg
aaaggtgactttgataaagagtctttcaacgaagcattcatgatgcacacttcaacttca
cctcagtacggcattgttgcttctactgaaactgcagcggcaatgatgcgcggcaacact
ggtaagaagttgatgcaagactctatcgatcgcgcaatccgcttccgtaaagagatcaaa
cgcctagaagcagaaagtgacagctggttcttcgatgtatggcaaccagaaaacatcgat
accacagaatgttggaaactagaccctagcgacacatggcacggcttcaagaacatggat
gacaaccacatgtatcttgacccaatcaaagtcacgctactgactccagggatgaacaaa
gaaggcgaactagaagaatcaggtattcctgcttcgctggtggctaaattcctagacgag
cgtggcatcgtggtagagaaaacaggtccatacaacttgttgttcctattctcaatcggt
atcgacaaatcaaaagcaatgcaattgctacgcggtctaactgaatttaaacgtggctac
gacttgaacctaaccatcaagagcttcttaccttcgctatacaacgaagacccaagcttc
tatgaaggcatgcgcgttcaagaactagcacaagcaattcatgacctaactaagaaatac
aacctaccagagctaatgtacaaagcgttcgatgtacttccagaaatgaaagtaacacca
cacgcagcatggcaagaagagcttcgcggtaacgtagaagaaatcaaactggaagaaatg
gttggccgcgtaagtgcgaacatgatccttccttaccctccaggtgtgccactagtactt
cctggtgaaatggtgactcaagagtctcgcccagtgctggacttcctagagatgctttgt
gagatcggtgcgcattaccctggtttcgaaaccgacatccacggtctgtaccaacaaaaa
gatggtagctacaccgtaaaagtattgaagaactaa
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