Vibrio paracholerae: SA104470976_00210
Help
Entry
SA104470976_00210 CDS
T08432
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpl03009
]
SA104470976_00210 (rimO)
Enzymes [BR:
vpl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SA104470976_00210 (rimO)
Ribosome biogenesis [BR:
vpl03009
]
Prokaryotic type
ribosomal protein modification factors
SA104470976_00210 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF5005
SAM_HAT_C
Motif
Other DBs
NCBI-ProteinID:
SYZ80372
LinkDB
All DBs
Position
1:complement(221282..222694)
Genome browser
AA seq
470 aa
AA seq
DB search
MTVQTFTPNQTTTLETAKKTIAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEG
YEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHP
NVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCT
FCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPV
RHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMM
KRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFK
YSPVEGAAANEIEEQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGA
IGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSVLHDAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgacagttcagacttttacgccaaatcaaaccacgacactggaaacggcgaaaaaaacc
atcgccgagcaaagccaaaatagccaaaccacaggcaataaaattggttttgtttcctta
ggttgcccaaaaaacttagtggattcagaacgcattctgacccaactacgcactgagggg
tatgagatcgtcaacagctaccacgactccgatgtggtgatcgttaacacctgtggtttt
atcgacagtgcggtgcaagagtctctggataccattggcgaagcgctgaaagagaacggc
aaagtgattgtgacgggctgcctcggcgcgcgtgaagatgaaattcgccaagtacacccc
aatgtgctcggtattacagggccacacgcttaccaaaacgtattggagcacgtacaccaa
tacgcgccaaagccagcccacaacccgtttaccagcctagtgccggatcacggggtgaaa
ctgacgccaaagcattacgcttacctgaaaatttctgaaggttgtaaccaccgttgtact
ttctgcatcatcccttcaatgcgtggggatttggtaagccgcccagtgggtgaaattatt
ggtgaagcggaacgcctgaaaaatgctggcgtaaaagagctgctcgtaatcagccaagac
accagtgcttacggtgtggataccaaacacagcctaggttttgccaacggctcaccggtg
cgccacaacatcaaagcgctcagtgaagagcttggcaaaatgggcatttgggttcgtctg
cactacgtttacccttacccacatgtggatgaaatcatcccattaatggcagaaggaaaa
gtgctgccttacttggatattccattccaacacgccagcccacgtgttctgaaaatgatg
aagcgtccgggacaagcggagcgcactttagagcgcatcaaaaaatggcgtgaaatctgc
ccagagctcgtgatccgctccacctttatcgtgggcttcccgggcgaaactgaagaggat
ttccaaatcctgctcgattggctgaaagaagcacaactcgatcgcgtgggctgctttaag
tactcgcctgttgaaggcgcagcagcgaatgagattgaagagcaaatcccagaagacgtg
aaacaagatcgtttcgaacgctttatgctcgtgcagcaagagatcagtgctgccaaactg
caaaaacgcatcggcagcaccatgcaagtgctgattgatgaagtcgatgaagaaggcgcg
attggccgtacttacgccgatgcaccagaaattgatggcttggtttacctcaacggtgaa
accaacctgaaaccgggtgagctggttaacgttgtgattgaacacgccgatgaatacgac
ctatggggcagcgtactgcacgacgcgcagtaa
DBGET
integrated database retrieval system
