KEGG   Vibrio paracholerae: SA104470976_00541
Entry
SA104470976_00541 CDS       T08432                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vpl  Vibrio paracholerae
Pathway
vpl00740  Riboflavin metabolism
vpl01100  Metabolic pathways
vpl01110  Biosynthesis of secondary metabolites
vpl01240  Biosynthesis of cofactors
vpl02024  Quorum sensing
Module
vpl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vpl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    SA104470976_00541 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SA104470976_00541 (ribD)
Enzymes [BR:vpl01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     SA104470976_00541 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     SA104470976_00541 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: SYZ80691
LinkDB
Position
1:580084..581187
AA seq 367 aa
MPMFTSFDHQMMSRAIELAWRGRFTTSPNPNVGCVITRGEEIVGEGFHFRAGEPHAEVHA
MRQAGELTRGATAYVTLEPCSHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQML
RDAGIEVEVGLLEADARALNRGFLKRMETGMPYVQLKMAASLDGQTALANGKSQWITSPA
ARKDVQRFRAQASAILSTSQTVLADNASLAVRWHDLPSSVQAQYAEADLRQPLRVILDRQ
HQLHPELALYQTPSPVLRVASENADLCISAENGKLDLRELLAQLAQQHNVNQVWVEAGSQ
LAKSLIEQKLVDEIILYLAPKLMGSDGRGLFGALGLTEMAEAIELKIEDCRMVGADLRII
ATPKTKD
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcctatgtttacctcttttgatcatcaaatgatgtctcgcgcgattgaacttgcgtgg
cgcgggcgttttaccacttctcctaatcctaatgtcggctgcgtcatcactcgcggtgag
gagattgtaggggaaggtttccattttcgcgcgggcgaaccccatgctgaagtgcatgct
atgcgccaagccggtgagcttacccgcggtgcgaccgcttatgtcactttagagccttgt
tctcattatggtcgcacaccgccttgtgctgaagggcttattaaagccggggttgcgaaa
gtgatttgcgcaatgcaagaccctaacccacaagtggcggggaagggcgtacaaatgctg
cgtgatgccgggattgaggttgaagtgggattgctggaagcggatgctcgagcactcaac
cgcggttttctaaagcgtatggaaaccggcatgccttatgtgcagcttaaaatggcggcg
agtctcgatggacaaaccgcgctcgctaacggtaaaagccagtggatcacctctcctgca
gcacgtaaagatgttcagcgctttcgcgcgcaagccagtgcgattctctccaccagtcaa
actgtgctggcggataatgcttctctagccgtgcgttggcacgatttaccgtcatcggta
caggcgcaatacgcagaagcggatttgcgtcagccgctgcgggtgattttggatcgccaa
catcaattgcatcctgagttggcattataccaaacaccttcgcccgtactgcgagttgcc
agcgagaatgccgatctctgtatttctgctgagaacggaaagcttgatttgcgtgagctt
ttggcacaactcgctcagcaacacaatgtgaatcaagtatgggtagaggcggggagccaa
ttagcgaaatccttgattgagcaaaagttggtggatgaaattattctctatttagcgccg
aaactgatgggcagtgatggccgtggtttatttggtgcactcggtttgacggaaatggct
gaggccattgaactcaaaatagaagattgtcgaatggtgggggcagatttgcggatcatc
gccaccccaaaaacaaaagattag

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