Vibrio paracholerae: SA104470976_01386
Help
Entry
SA104470976_01386 CDS
T08432
Symbol
vieA
Name
(GenBank) response regulator VieA
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
SA104470976_01386 (vieA)
Enzymes [BR:
vpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
SA104470976_01386 (vieA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
SYZ81500
LinkDB
All DBs
Position
1:complement(1501638..1503392)
Genome browser
AA seq
584 aa
AA seq
DB search
MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
ISLLSQLSLQAPKIGVVILSAVEDTILELTHNMCSLAGFAYVDRLSKPYEVEDLQRVVEG
FQKQTEPETSHKPAITLTYDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIAADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
LPFTELKIDRSFVHDLASNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
TCQGYYAAKPMPIAKLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEE
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGATLVLHDGL
TAETQQDESKAIVVKANTLMETSSRILQQAQQSTVRPQAQQEELAQLSERELTVAKMLVE
GLTNKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgattgtagaagatgatcgaattcaggcgacgagcctgaaactcaagcta
agacagcttgggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactg
tgtaacaaagtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatggg
atcagtttgttatcacaactgagtttacaggcacctaagataggtgtggtgatactcagc
gcggtggaagatacgattcttgagttaactcacaacatgtgtagtttggctggatttgct
tatgttgatcgcctttctaagccttacgaagtggaggatttacagcgtgttgtcgaggga
tttcaaaagcaaacggagcccgaaaccagtcacaaacctgcaatcacgctaacctatgac
gagattgaacaagcttttttgcacgaccatatttttaattactatcaaccacagtttgat
tttcgcagtggggcgatggtcggcgttgaagcgctagtacgttacgagcacccaactcat
ggcatgttaagtccagcggtgtttctgcctttaattgagcagtgtggtttgcatgagaaa
ctcttccttaccgtattagaaaagtcggtctctgcactggccagtattgctgctgacttg
cagctttccgtcaacatcagccagcgcaacttgcaacactcgatctgtgatcctattctc
gccatctgtgagcggtatggttttcccgcaagtaaactgactctagagatgacagaacat
gaagtatacaacggaaccccgacctcattggctaaccttgctcgactgagaatgtatggt
gttggcttatcgattgatgattttggtacgggttatgcgtcattaggccaactggctcaa
ctgccttttacggaactcaagattgatcgcagctttgtgcatgatttggcaagcaactac
aaacaccaacaattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgc
gtcgtcgaaggggtagagaacgaagagacatggcaatacttacgtcaacttggggtagat
acttgccaaggttactacgccgctaagcccatgccgattgctaagttgagcgagctttac
accaaaaatcgtcgtcagtgtttaggttgtcaaagcatggatgatggctggcaaatcttg
ctggtggataaccatatgctcagcgctacggcactacaaaaagtgctcaataaagaagag
aacgtcagcaaggtgtttgtggcacaagatattgagcagacgctgcacaaactgcgcgat
ttaccgatcaacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggca
tttcacgagttgcttgagccttactatcgaggggcgaccttggtgctgcatgatgggtta
accgctgaaactcaacaggatgagtccaaggccatcgtcgtcaaagcgaatactttgatg
gaaaccagctctcggatcttacagcaagcgcagcagagcactgtgcgcccacaggcgcaa
caagaagagcttgctcagctttctgagcgagagttgacggttgcgaaaatgttagtggaa
gggctgacaaataaagaaatcgccctacaactcgatatcaatcaaaaaactgtaagcact
tacaagactaggattatgaccaagttagggattaaatcggccatggaattggtgcgtttt
gtaacattaaaatag
DBGET
integrated database retrieval system
