Vibrio paracholerae: SA104470976_01423
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Entry
SA104470976_01423 CDS
T08432
Symbol
rafA
Name
(GenBank) Alpha-1,6-galactosidase, putative
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00052
Galactose metabolism
vpl00561
Glycerolipid metabolism
vpl00600
Sphingolipid metabolism
vpl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
SA104470976_01423 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
SA104470976_01423 (rafA)
00600 Sphingolipid metabolism
SA104470976_01423 (rafA)
Enzymes [BR:
vpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
SA104470976_01423 (rafA)
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Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_31_2nd
Raffinose_syn
GHL6
GHL10
Motif
Other DBs
NCBI-ProteinID:
SYZ81536
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All DBs
Position
1:complement(1543364..1545100)
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AA seq
578 aa
AA seq
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MSHLRLANGREILEQQSDIELEIVGNELSARYIGLHNRPFERRYPLFSTLLDVESDARLV
GDGFQMLSQASGTLSHIQEVGRCPDNNLSYRIYPHDAPKRFYNTLMIEAAGRYLLFGFTS
CQRFAGFFEVHRHPQHWVLSAFIDGEETRPQDWITNQLESVICLEGESMSDLYQAYAEAI
SRHHPPRPHLKDPAPIGWCSWYAYYAEVTEQDIKENVAILAERHPELEWVLLDDGYQAFM
GDWLTPSQKFPSGIEQVIADIRAQGKKPAIWLAPFIAEADSAVFRQHPDWFVKNAAGQPL
KAEEITYGGWRCTPWYVLDCSHPDVQEHLTQVVKTLREEWGVELFKLDANYWGTLQGQRF
QSGVTGVEAYRMGMQAIAEGAGDGWLLGCNAPMWPSLGLVDAMRVSDDVERNADRFCQIA
RETLMRSWQHRQLWQIDPDCLTLTSLPNQNADRISYEFHRNLLLASGGLLLSGDPLPTLT
PFAKQSLKRLLKRFQYSQKAAKITSLSMRHAFLPLTDKNDLHCLFNFNGKAQEFTLVANH
PVQWYDYWTGEQLSSEPSKLLIVNLEKGLQSRAIFTVG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagccatctcagattagccaatgggcgagaaatcctagagcagcaatcggacattgag
ctggagatcgtaggtaatgagctttccgcgcgatatatcgggctacataatcgacctttt
gaacgccgttatccactgtttagcactttactggatgtcgaatcagatgcacgcctggtt
ggggatgggtttcaaatgctatcgcaagcctcagggacgctaagccatatccaagaagtt
ggacgatgcccagataacaatctcagttaccgcatttacccgcatgatgcgccaaagcgt
ttttacaacaccttgatgatagaggcagctggccgctatctgttgtttggctttacttct
tgccagcgctttgctggcttttttgaagtgcatcgccacccgcagcattgggtgttaagc
gcgtttattgatggagaggaaacccgaccacaagactggataaccaatcaattagaatcg
gtgatttgtttagaaggcgagtccatgtcggatctttatcaagcctatgcagaggcgatt
tctcgccaccatccgccaagaccccatctcaaagatcctgcaccaataggctggtgttct
tggtacgcctattatgcagaggtgaccgagcaagatatcaaagagaatgtcgcgatattg
gcggagcgtcatccagaattggagtgggtgcttctggatgacggctatcaagcctttatg
ggcgattggcttacgccatcccaaaaattccccagtggtattgagcaagtgattgccgat
attcgcgcccaaggtaaaaagcccgctatctggcttgccccttttatcgcggaagcggat
tctgcggtctttcgtcagcacccagactggtttgtgaaaaatgccgcaggtcagccactc
aaagccgaagagatcacttatggcggttggcgttgtactccttggtatgtgttggattgc
tctcatcctgacgtgcaagagcatttgacccaagtagtcaaaaccttacgtgaagagtgg
ggcgttgagctttttaagctggatgccaactactggggaacgctacaaggccagcgtttt
caatcgggtgttacgggtgtagaagcgtatcgaatgggcatgcaagccatcgcggaaggc
gcaggcgatgggtggttacttggctgtaatgcgccgatgtggccttcactgggtttggtg
gatgcgatgcgcgtgtcggatgatgttgagcgcaatgccgatcgcttttgccaaatcgcg
cgtgagaccttaatgcgcagttggcagcaccggcagctgtggcaaatcgatccggattgc
ttaacgctcacctcgctgcccaaccaaaatgcagatcgcatcagctacgaattccaccgt
aatttgctgcttgccagcggtggtttgctattgtcaggcgacccactgccgacattaaca
ccgtttgcaaaacagagcctgaaacgtttactcaaacgattccaatacagtcagaaggcg
gccaaaatcacttccttgagcatgcgccatgccttcttaccgctgaccgataagaatgat
ctgcactgcttgtttaacttcaacggtaaagctcaggagtttaccttggtcgccaatcat
ccggtgcaatggtatgactattggacaggagagcaattaagcagcgaaccttccaaactg
ctcatcgttaacttagagaagggcttacaaagccgcgccatttttacagtgggttag
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