Vibrio paracholerae: SA104470976_02421
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Entry
SA104470976_02421 CDS
T08432
Symbol
ubiD
Name
(GenBank) 3-polyprenyl-4-hydroxybenzoate carboxy-lyase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vpl
Vibrio paracholerae
Pathway
vpl00130
Ubiquinone and other terpenoid-quinone biosynthesis
vpl01100
Metabolic pathways
vpl01110
Biosynthesis of secondary metabolites
vpl01240
Biosynthesis of cofactors
Module
vpl_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SA104470976_02421 (ubiD)
Enzymes [BR:
vpl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
SA104470976_02421 (ubiD)
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GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Cyt-b5
Motif
Other DBs
NCBI-ProteinID:
SYZ82466
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Position
1:complement(2609040..2610881)
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AA seq
613 aa
AA seq
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MNFKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFENPLGYDFPVL
TNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVLNMPVK
RLRRAPCQEIVWQGDEVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHKKRQNLGIYRQQK
IARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVTPVPDTLSEYA
FAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEVERHHV
FTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIADFYLPPEGCSY
RMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQVIAAMVNHMSP
LRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATVKWPAELVLSNSDQSDKTTELSLEVLK
ACLSDEADVLDVALPEAANGKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDD
DVNIHDWNDVIWAMTTRMDPARDSLRIVGQDLICFDATNKLPDEVEREWGTPIRKDPKLV
AKIDSLWDELGIV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaggacttacgggattttcttgactatttagagcaacgtggggagctaaaa
cgtattacccatccgattgatccgcattatgaaatgaccgagatcagcgaccggacgtta
cgtgctaaaggtccagcattgttgtttgaaaatccgctaggttacgactttccagtgcta
accaatttgtttggcacgccagaacgcgttgcgatgggcatggggcgacagcaggttcaa
gagctgcgcgatgtcggtcagtggttggcttatcttaaagagccagaaccgcctcgtggt
ttaaaagagctgattgaaaagctgcccgtttttaaacaagtgctcaatatgccagttaag
cgcttgcgtcgtgctccttgccaagaaatcgtgtggcagggtgatgaggttgatctcgat
aaaatccctgtgatgagctgctggccggacgatgttgcaccacttttaacttggggttta
accattacgcgtggcccacataaaaagcgccaaaaccttgggatctatcgtcagcaaaaa
atcgcccgtaataaagtcatcatgcgttggttagcccatcgcggaggggcattagacttg
cgggattggatggaaaaacatcccggagagccttttcctgtcagtgtggcgtttggtgcc
gatccggcgaccattctcggtgcggtaacgccagtcccagataccttatctgaatacgcg
tttgctggactgttgcgtggcagtcgtactgaagtggtcaagtcgatcagtaacgatctg
gaagtgccggcgagtgctgaaatcgtgctcgagggctatatcgatcctaacgaatttgca
gatgaaggtccctatggcgatcacacaggttattacaacgaggttgagcgccatcatgtg
ttcactgtcactcatgtgaccatgcgtaataagccgatttatcacagcacctatacaggg
cgtccgcccgatgaacccgccgtacttggtgtggcgcttaacgaagtcttcgtacctatc
ttgcaaaagcagtttcctgaaattgccgatttttatctgccgccagaaggctgctcgtat
cgcatggcgatagtgacacttaagaaacagtatccgggacacgctaagcgggtgatgctg
ggtgtgtggtcattcctacgtcaatttatgtacaccaagtttgtgattgtgtgtgatgaa
caagtgaatgcgcgcgattggccacaagtgattgccgctatggtcaatcacatgtcgcct
ctgcgcgatactctatttattgagcatacgccgattgactcgctggattttgcttcacca
gtggtcggcttaggctcaaaaatcggtttggatgccaccgtcaaatggcctgcagagcta
gtgctttctaactctgaccagagtgacaagacaacggaactttcactggaagtgctaaaa
gcctgcttgagtgatgaagcggatgtgttggatgttgcattaccggaggcggcgaatggt
aagttggttcttctacttattaataagcaggaagctgggcaggcacagcaactgttacag
cgtgtagtcgataaactcaatggtgactcgccgcttaagtttgtgatcttgtgcgatgat
gacgtgaatatccatgactggaatgatgtgatctgggcaatgaccacacgcatggatccg
gcacgtgatagcttacgaatcgttggccaagatttgatctgctttgatgcaaccaataaa
ctgcctgacgaagtcgaacgtgaatggggcactccgatccgaaaagatcctaagctagtc
gcgaaaatcgattcgttatgggatgagttaggcattgtatga
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