Vibrio paracholerae: SA104470976_02593
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Entry
SA104470976_02593 CDS
T08432
Symbol
rsmD
Name
(GenBank) ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
vpl
Vibrio paracholerae
Brite
KEGG Orthology (KO) [BR:
vpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpl03009
]
SA104470976_02593 (rsmD)
Enzymes [BR:
vpl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
SA104470976_02593 (rsmD)
Ribosome biogenesis [BR:
vpl03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
SA104470976_02593 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
Methyltransf_25
MethyltransfD12
Met_10
TRM
Methyltransf_15
RrnaAD
SAM_MT
Methyltransf_12
Methyltr_RsmB-F
RsmJ
Methyltransf_4
DNA_methylase
FtsJ
GidB
Spermine_synth
Methyltransf_11
N6-adenineMlase
Methyltrans_SAM
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
SYZ82626
LinkDB
All DBs
Position
1:2802628..2803227
Genome browser
AA seq
199 aa
AA seq
DB search
MQRRRQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETLFNWLAQEVPN
ARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKTNVQSLKAENIELIHTDALAF
LRQSGKPYDVVFIDPPFRQGLLQETTQLLEQNGWLAPQAMIYIECEKELPLTELPPHWHL
HREKIAGQVCYRLFIREEQ
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagacgtcgccagccaaacccatcacaaaaaaaggcccctacagggcaagttcgg
atcatcagcggcctgtggcgtggccgaaaattacccgtgcatgatgccgaagggctacgc
ccgacgaccgatcgagtgaaagaaacgctgtttaactggcttgctcaagaagtgccaaat
gctcgctgtctcgatctttttgcaggttctggcggcctaggcttcgagtgtgcatcacgc
caagccaaccaagtaaccatgcttgagctgaacccgctcgcctttcagcaactcaaaact
aatgtacagagcctgaaagcagaaaatattgagcttattcacacggatgcactcgcattt
ctgcgacaatcgggtaaaccttatgacgtggtgtttattgacccaccttttcgacaaggt
ttgttacaggaaaccactcagttactcgagcaaaacggttggctcgcgccacaagcgatg
atttatattgagtgcgaaaaagagctgccactgacggagttacctcctcattggcatcta
catcgagaaaagatcgccggacaagtctgttatcggctgtttataagggaagaacaatga
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