Virgibacillus dokdonensis: A21D_01460
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Entry
A21D_01460 CDS
T05261
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
vpn
Virgibacillus dokdonensis
Pathway
vpn00750
Vitamin B6 metabolism
vpn01100
Metabolic pathways
vpn01240
Biosynthesis of cofactors
Module
vpn_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
vpn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
A21D_01460 (pdxS)
Enzymes [BR:
vpn01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
A21D_01460 (pdxS)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
OMPdecase
TetR_C_27
FMN_dh
Motif
Other DBs
NCBI-ProteinID:
AUJ24541
UniProt:
A0A2K9J3F4
LinkDB
All DBs
Position
complement(1539196..1540080)
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AA seq
294 aa
AA seq
DB search
MSNIGTERVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVAR
MADPTITEEVLGAVSIPVMAKARIGHITEARVLEAMGVDYIDESEVLTPADDIYHINKSD
YTVPFVCGCRNLGEAARRIGEGASMLRTKGEPGTGNIVEAVRHMRQVQSEIRMVSAMSRD
EVMTYAKEIGAPFELLLQIREEGRLPVVNFAAGGIATPSDAALMMELGADGVFVGSGIFK
SANPAKFAKAIVEATTHYQDYKLIAELSKDLGDAMKGLDMATIEAHDRMQDRSE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaatataggtacagaacgtgtaaaacgaggtatggcagaaatgcaaaaaggcggc
gtcattatggatgttgtcaatgcagaacaagctaaaatcgctgaagaagcaggtgcagta
gctgttatggcacttgaacgtgttccttcggatattcgagctgctggtggcgtagctcgg
atggcagatccgacaattacagaagaagtacttggagctgtatccattccagtgatggcc
aaagctcgaattggacatattacagaagcacgtgttttagaagcgatgggtgtagactat
attgatgaaagtgaagtcttaactcctgccgatgatatttatcatattaataaatctgat
tatacggtaccgtttgtttgtggttgccgtaatcttggggaagcagctcgtcgtataggc
gaaggcgcttcgatgctacggacaaaaggagagcctggtacaggaaatatcgttgaagct
gtgcgtcatatgcgccaagtacaatcggaaattcgcatggtgtctgctatgtcccgtgat
gaagttatgacatatgcaaaagaaattggtgcgccatttgaattattattgcagattcgt
gaagagggtcgcttgcctgtagttaattttgcagcaggtggtattgctacgccaagcgat
gcagcactaatgatggaattaggagctgatggtgtatttgttggttctggtatatttaaa
tcagcaaatccggctaaattcgccaaagctatcgtggaagcaacgacacattatcaagac
tataaactaattgcagaactttccaaagatcttggcgatgcgatgaaagggctagatatg
gctacaattgaagctcatgaccgaatgcaagatcgtagcgagtaa
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