Vespula pensylvanica (western yellowjacket): 122628396
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Entry
122628396 CDS
T07720
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09150 Organismal Systems
09151 Immune system
04624 Toll and Imd signaling pathway
122628396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vps03000
]
122628396
Transcription factors [BR:
vps03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
122628396
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank
Ank_2
RHD_dimer
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
122628396
NCBI-ProteinID:
XP_043666593
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All DBs
Position
4:complement(1897883..1903388)
Genome browser
AA seq
900 aa
AA seq
DB search
MHLKMPEYKNFEAMKGIFDDLQDYGTCENDLMFISSTNALSLYNNHIDSNVNFNIESPMS
TTSSLSHIPTYMSLDDYTAIGEPHLIITEQPVEKFRFRYKSEMIGTHGSLVAASNTTAHK
KCAPTVQLRNFQDKAIIRCTLVTSDDRKERLPHAHHLVRRTGHKDQDDPHEIEVSQENGF
TAAFHGMGIIHTAKKHIKDELVRKLQFELLEERKRKNINAILSTRDEVQIKADADIYQKS
INLNSVSLCFQAFIKDRNNIMTPLTEPVYSNPINNLKSALTGELKICRIDKFTSSCEGGE
EVFILVEKVGKKNIRIKFFELNEDIEVWSDYGRFSELDVHHQYAIVFRTPPYKDMNITSS
KEVFIQLERPSDHDCSEPIKFTYKPSDKILGRKRPRTSYSNSIELAQSLSTMQNNDSFTK
LNDSQEISKELKDILLEGCSSSEYRNFLQGVDLDKYMKLLNNSEEEGLTWDGPSTKKLDD
DIIFAKNIVFEAINIVQKEINNKNGEISPNKKKQLKKLLMDRSTYGDSPLHVALRYGQRD
LVKYILILMGTDPEYQILVNIQNSSGKTPLHYAVLQNQPIIIKALLTLGADPSICDDHGF
SPLHTAVRIPNAGACVDTLLSNKLIDIESYNDLGWTSLQLAAEAGSYDAVCSLVRAGANV
NNTDKSYGRTVLHIAVEGGHKEIVEFLLRNSDIDINKSNFSGNTALHTAVAYSGTRAKEL
CKLLMEYGADPHIQNNSSSSLDDMEQEINEVNIKVEVESEEENIDETVGQSSFDLATNKP
EILQLLMGHDSNTQEENKLISSTKEEILNEDTKNNWLNNENKQKLAAILDKTKGWEKLAK
HLNLEFLLQSLCQNSLSPSLLLLNYIDVQGDITLTQMHDLLNEIKEVEAALFIIDVVRHQ
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaaaaatgccggaatataaaaatttcgaagcgatgaaaggaatatttgatgat
cttcaggattacggtacttgtgaaaatgatctaatgttcattagctctactaatgcattg
agtctttataataatcatatagattcaaacgtaaattttaatattgaatcacctatgtct
actacttcgtcactatcacatatacctacatatatgtcattagatgattataccgctatt
ggtgaaccacatcttatcataacagagcaaccagtagaaaaatttagatttcgttataaa
tctgaaatgatcggaacgcatggaagtttagttgcagcaagtaatacgactgctcataaa
aaatgtgctcctactgtccaattaagaaattttcaagataaagcaataattcgctgtaca
ttggttacatcggatgatagaaaggaaagacttccacatgctcatcatctagtcagaagg
acaggacataaggatcaagatgatccccacgagatagaagtttctcaagaaaatggattt
actgctgcatttcatggaatgggtataatacatactgcaaaaaaacatatcaaggatgaa
cttgtacgaaaacttcagtttgagttactagaagaacgtaaaagaaaaaatattaatgcg
attctttcaacacgtgatgaagtacagattaaagctgatgcagatatttatcaaaaatca
ataaatcttaatagtgtgtctctgtgctttcaagcttttattaaggatagaaataatatt
atgactccacttacagaacctgtttattctaatccgattaataatcttaaaagtgctctt
actggggaattgaagatctgcagaatagataaatttacaagttcttgtgaaggtggagaa
gaagtatttatattagtagaaaaagttggaaaaaaaaatataagaataaaattttttgaa
ttaaatgaagatattgaagtctggtctgattatggtcgcttttctgagttggatgtacat
catcaatatgctattgtattccgcactccaccatataaagatatgaatattacctcttca
aaagaagtttttatacagttagaacgaccaagtgaccatgattgctcagaacctattaaa
tttacatataagccaagtgacaaaatattaggtagaaaaagaccacgtacatcttattca
aatagtattgaattggcacaatcattatctactatgcaaaacaatgattcatttacaaaa
ttgaatgatagccaagaaatctctaaagaattaaaagatatattactagaaggatgctca
tcttcggaatatcgtaattttctacaaggcgtagatctggataaatatatgaaactatta
aataatagtgaagaagaaggactcacatgggatggtccgtctacaaaaaaattggatgat
gatatcatatttgccaagaatattgtatttgaagccattaatatcgttcaaaaggaaata
aataataaaaatggagaaattagtcctaataaaaaaaaacaattaaaaaagttacttatg
gatagatctacttatggcgattcaccattgcatgtagctttacgttatggtcaacgcgac
ctcgtaaaatacattttgatacttatgggaactgatccagaatatcaaatacttgtaaat
atacaaaacagttcaggaaaaacaccgttgcattacgctgttctacaaaatcagccaatc
attataaaagcattattaacacttggagcagatccaagtatatgtgatgaccatggtttc
tctccattacatactgctgtaagaatacctaatgctggagcatgtgtagatactttatta
tccaataaactaattgatattgaaagttacaatgatcttggatggacatctttacaactc
gctgcagaagcaggttcatatgatgctgtatgctctctcgttcgagcaggagctaatgta
aataatacggataaatcgtacggccgtactgtattacatatagcagttgaaggaggtcat
aaagaaatagttgaatttttattaagaaatagtgatattgatataaacaaaagcaatttt
agcggaaatacggcattacatactgcagtagcatattctggaacaagagcaaaagaatta
tgtaaattattaatggaatatggagcagatccacatatccaaaataatagcagttcaagc
ttagatgatatggaacaagaaataaatgaagttaacataaaagttgaagtagaatccgaa
gaagaaaatatagatgaaactgttggacagtcatcctttgatttagctactaataagcca
gaaattttgcaacttctaatgggacatgatagtaatacacaagaagaaaataaattaatc
tcatctacaaaagaagaaatattaaatgaggatacaaaaaataattggttgaacaatgaa
aataaacagaaattagctgcgattttggataaaacaaaaggctgggaaaaattagctaaa
catttaaatcttgaatttcttttacaatcattgtgccaaaactcattaagtccatcttta
ttacttttaaattatatagatgtacagggtgacattacacttacacagatgcatgatttg
ttaaatgaaatcaaagaagttgaagcagcattatttatcatcgacgttgtgagacatcaa
taa
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