Vespula pensylvanica (western yellowjacket): 122635793
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Entry
122635793 CDS
T07720
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
vps
Vespula pensylvanica (western yellowjacket)
Pathway
vps03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vps00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122635793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vps03021
]
122635793
Enzymes [BR:
vps01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122635793
Transcription machinery [BR:
vps03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122635793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
BUD22
Drc1-Sld2
Nop14
Motif
Other DBs
NCBI-GeneID:
122635793
NCBI-ProteinID:
XP_043682376
LinkDB
All DBs
Position
19:118613..124238
Genome browser
AA seq
1716 aa
AA seq
DB search
MQKYQKNRSSPKHLDPKCLTFSIFTTEDVINLSVIKIRTPLSFNILGHPLKGGLYDPALG
PLLESSDPCATCGSTVFKCPGHFGHIELPMPVVNPLFHKALSMLIKLSCLNCFTLQIPTH
IKMLLRGKLKILEMGLLSDIDGLEDEITSAKPKSQDVHESDLVYIRDIIETYIRNLANRT
RYTPSNDPNGILLNTKNVNAQWQSHVDSVLKQYTAGKICINCQEAIPKITILRNKIMTTK
INDANFASTNVKSHTVVNKLETVIVMPDQSKEYLRKLWQNEKEFLKVIIPCLNDVNTEYA
TDVFFFDVVPVLPPIVRPINFLHGQMIEHPQSQVYKSIIQDCLILRNIIQSIQDGDTSRL
PEEGKIVFEQIKGGTAVEKLHNAWQTLQTDVDHLMDRELNKTPDSANCHGLKQVIEKKEG
VIRMHMMGKRVNYAARSVITPDPNLDIDEIGIPETFALKLTYPIPVTPWNLLELRQLVLN
GPNVHPGAVIIENEDGSVQRLSPFDVTKREAIAKRLLPSSDKANRFFNGIKIVHRHLQNG
DMLLVNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDECNVHFPQNELAR
SEGYLIANVSNQYLVPKDGTPLSGLIQDHVISGVRLTTRGKFFCRTDYMQLVYCALVAHK
GNLKLLPPTILKPVPLWSGKQIISTVLINITPPNTAQINLKSSAKINAKQWQTGKARRWK
CGVELKNPEEMSEAEVVIRNGELLCGVLDKTHYGATPYGLVHCVYELYGGSSSSKLLSAF
GKLFQAFLQRDGFTLGIEDILIVSSADAKRKEIVSECRRLGGEMQRSLLEMPGDAPSEVV
SSKMEESYRTEPKFRAQVDRKYKNVLDVYTNDINKTCLPAGLLKKFPHNNLQLMVQSGAK
GSMVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIRPQE
FFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVINYDSTVRDSDGSLIQIYYGEDG
LDVPASTFLKKDQMDFLVDNRNVIVDPNLVTYLKEDSNYESTLRSIRKVKKWSKKNGGST
LNRKRRNEFSLFSADNFNPDSSKFKRIDENSGRSKGTLSLIRKWIRMDEETKRSYKKQCT
GCPDPLTSKLRQDVEFGVLSERLEDLMDEYMSNKSFDRPIGKTELRDLLSMKVMKSICPP
GEPVGLLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLREILMMASKTIKTPTMEIP
FKKDLPSLAKRSNKLRQKLTKCILTDVLKNIRIDKEMERFPQRRLIHTLRIEFLPHKYYK
NEFSVSPERVIEKTEQIFFKAMFREIKKIAKVTGTLIHVEDEKKRRGNKEDSLLDEDEPD
EPDDEPKASKSTNVKRDLGEQHESSDEEEAAEDADATVTRTMSRHRENQEYEEDTEDEVE
DRNEKDDEDDVAERIPRETRIEEGETEVNDEDDDDDDDDDDHESSEFGSGANNDKRTANA
KRKDIVNTYTYALEYEYDRVKSLWCELKFWLPLKMTKIDLPMIIRNVAGKVILWETPDIR
RAFTIESSDGETILKTDGINIIEMFKYDEVLDLSRLYSNDIYGISQTYGIEAANKVIIRE
VKDVFKMYGITVDSRHLSLIADYMTFDGTFQPLSRKGMNDSASPLQQMSFESSLNFLRNA
ILRRKQDDLRSPSSRLMLGQPCRSGTGVCSLLTKIL
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtatcagaagaatcgttcgagcccgaaacacctggatccgaaatgcctgacg
ttttcgatttttacaacggaagatgtgataaatttgagcgttataaagattagaacgcct
ctctcgttcaatattttgggccatccattgaaaggtggtttatacgatccagcattagga
cctttgctcgaaagttcggacccttgcgcaacgtgtggctccacggtgttcaaatgtcct
ggtcattttggccatatagaattacctatgccagtcgtcaatccgttgtttcacaaagcg
ttatccatgttgatcaagctgtcttgcttaaactgtttcactttgcaaatcccgactcac
ataaagatgctgctacgcggaaaactaaagatcttagaaatgggattgctcagcgacata
gacggtttggaagatgagataacatccgccaaaccaaagtcgcaagacgtacacgaatcg
gatctggtatatataagggacataatagaaacttatataaggaatcttgccaacagaacg
agatatacacctagcaacgatcccaacggaattctcttaaatacgaagaacgttaacgct
cagtggcagtctcacgtcgatagcgtcctgaagcaatacaccgccgggaagatttgtata
aattgtcaagaagctataccgaaaattacaattttaagaaataagattatgacgaccaaa
atcaatgacgccaattttgcatcgacgaacgtaaagtctcatacggtagtaaataaattg
gaaaccgtcatcgtaatgccggaccagtcgaaagagtacttgcgaaagttatggcagaac
gagaaagaatttctcaaagtgattataccttgtttgaacgatgtaaatacggagtacgca
accgacgtattcttcttcgacgttgtaccggtattgccgcccatagtaagacccatcaac
tttctccacggacaaatgatcgaacatccccagagtcaagtgtacaaaagtatcatacag
gactgtctcattcttaggaacattatacaatcgatacaggacggtgacacgagtcggcta
ccggaagaaggaaagatcgttttcgaacaaataaagggcggtacggctgtagagaagcta
cacaacgcgtggcagacgttgcaaacggacgtggatcacttaatggacagagaattgaac
aagactccggattcggcaaattgtcacggattgaaacaggttatcgagaagaaggagggc
gtcataaggatgcacatgatgggtaaaagagtgaattacgcggcacgttccgtcattacg
cccgatccgaacttggacatcgatgagataggcattcccgagactttcgcgcttaaattg
acctatccgatacccgtgacaccctggaatctgctcgagctgcgacagttggttttaaac
gggccgaacgttcatccaggcgcggtcataatagagaacgaagatggttccgtccaacgt
cttagccctttcgacgtaaccaagagggaggccatcgcaaagcgtctactaccgagcagc
gataaggccaatcgtttcttcaatggcattaaaatcgtgcacagacatctgcaaaacggc
gatatgcttttggtgaatcgtcaaccgacgttacataagcccagtataatggcccacaag
gcgcgcatcttgaaaggtgaaaaaacgttgcgcctccattacgccaactgcaaggcgtac
aatgcggacttcgatggcgacgaatgcaacgtccactttccgcaaaacgaactcgcgaga
agcgagggatacttgatcgcgaatgtgtccaatcaatatctcgtaccaaaggacggcact
ccattgagcgggcttatacaggatcacgttatatccggcgtacgtttaaccacgagaggt
aaattcttttgtcgcaccgactacatgcagttggtctactgcgcgttggtagcgcataaa
ggaaatttgaaattgttaccgccgaccattttgaagcccgtaccgttgtggtcgggcaag
caaataatatcgaccgtacttatcaacatcactcccccgaataccgcacaaatcaatctg
aagtcgagcgcgaagatcaatgcgaaacagtggcaaacggggaaggctcgccgatggaaa
tgcggcgtcgaattgaaaaatcccgaagaaatgtcggaggcggaggtcgtaataaggaac
ggggagctcctttgcggcgtactcgacaaaactcattacggtgcgaccccttacggtctg
gtacattgcgtttacgaattgtacggtggatcgtcttccagcaaattgctgagcgctttc
ggtaaactttttcaggcatttttacaacgagatggatttacgctcggtatcgaggatatt
ttgatagtttcgagcgcggatgcgaagcgtaaggaaatcgtatcggaatgtagaagattg
gggggagaaatgcaaaggagcttgttggaaatgcccggcgatgcgccttcggaggtcgta
tcgtcgaaaatggaggaatcttataggaccgagccgaagtttcgtgcccaggttgatcgg
aaatacaagaacgtgttggacgtttacacgaacgatattaacaaaacgtgcttaccggca
ggactcttgaagaagttcccccacaataacttgcaattgatggtacaatcgggagctaag
ggatccatggtaaataccatgcaaatctcgtgtttgctcggtcaaatagagttggaaggt
aaaaggccgccgctgatgataagcggcaaaagcttgccgagttttcccgcctatgatcca
acgccgagagcaggaggattcatagatggccgcttcatgacgggcatacgacctcaggaa
ttcttctttcattgtatggccggtagggaaggcctgatcgacaccgcagtgaagaccagc
agatccggttacttgcaaaggtgtcttataaagcatttagaaggcttggtgatcaattac
gattctaccgttagagattccgacggtagcttgattcaaatctattacggcgaagatggg
ctcgacgtacccgcttcgacgtttttgaaaaaggatcaaatggatttcctagtcgacaat
agaaatgtcatcgtcgatccaaatctggtaacgtacctgaaggaagattccaattacgag
tctaccttgagatcgataaggaaagtaaaaaagtggtcgaagaaaaatggcggtagcacg
ttgaatagaaagagaaggaacgagttttcgttattttccgcggacaactttaatcccgac
agttcgaaattcaaacgcatcgacgagaacagcgggagaagtaagggaactctttcgttg
ataaggaaatggataagaatggacgaggaaacgaaaaggtcctacaaaaagcaatgtacc
ggatgcccggatcctctaacgtccaagctcaggcaggacgtagaatttggggtactttcg
gagagattggaggacttgatggacgagtatatgtcaaataaatcgttcgaccgcccgata
ggaaagaccgaactgagagatcttttgtctatgaaggtaatgaaatccatatgcccaccg
ggggaacccgtcggtttgttggcggcgcaatccataggagagccgtcgacgcaaatgacg
ctcaacacgttccaccacgcgggacgtggcgaaatgaacgtcaccctgggcattcctcga
ctgcgcgagatactgatgatggcctcgaaaaccatcaagactcccacgatggaaatccct
ttcaaaaaggatttgccaagtcttgccaaacgatccaacaaattgcgacagaaattgacc
aagtgtatactcaccgacgtattgaaaaatatcagaatcgacaaggaaatggaacgtttc
cctcagagacgtttgatccacacgttgcgcatcgaatttttaccccacaaatattacaaa
aacgaattttcggtgagcccagagcgggtgatcgaaaaaaccgagcaaatctttttcaag
gcgatgtttagagagataaagaagatcgccaaggtaaccggtactttgatacacgtcgag
gacgagaagaagagacgtgggaacaaggaagattctttattggacgaagacgaacccgac
gaacccgacgacgaaccgaaagcgtccaaatcgacgaacgttaagagagatttgggagaa
cagcacgagtcgtccgacgaggaggaagccgcggaagatgcggatgcaacggtgactcga
acgatgtcgcgtcatcgagagaatcaagagtacgaggaagatacggaagatgaagtcgag
gatagaaacgagaaggacgacgaggatgatgtcgcggagaggatacctcgtgaaacgagg
atcgaagaaggcgagacggaagtgaacgacgaggacgacgacgacgacgacgacgacgac
gaccatgagagttccgagtttggaagcggcgcgaataacgacaaacgtacagcgaatgcg
aaacgcaaggatatagtgaatacgtacacgtatgcgctggagtacgaatacgaccgagta
aaatcgttgtggtgcgaattaaaattctggttgccgctcaagatgaccaagatagacctg
ccaatgatcatcagaaacgtagccggtaaagtgattctctgggagactcccgacataagg
agagcgttcacgatcgaaagttccgacggggagactattcttaaaaccgacggaataaat
ataatagaaatgttcaaatacgacgaggttttagacttatccaggttatattccaacgac
atctatggaatttctcaaacttacgggatcgaagccgccaacaaagtaataataagagaa
gtcaaagacgtattcaagatgtacggaataacggtggactccaggcatctctcgttgatc
gccgattacatgacgttcgacggtacatttcaaccgctcagtcgcaaaggcatgaacgat
tccgcctcgcctttgcaacaaatgagttttgaaagttctctcaattttttgcgaaacgct
atattacgaagaaaacaagacgatttgaggtcgccgtccagtcgattgatgctgggtcaa
ccctgtagatcgggtacaggtgtatgttctttattaacgaaaatactttaa
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integrated database retrieval system
