Vallitalea pronyensis: HZI73_12420
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Entry
HZI73_12420 CDS
T07178
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
vpy
Vallitalea pronyensis
Brite
KEGG Orthology (KO) [BR:
vpy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vpy03009
]
HZI73_12420 (rimO)
Enzymes [BR:
vpy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HZI73_12420 (rimO)
Ribosome biogenesis [BR:
vpy03009
]
Prokaryotic type
ribosomal protein modification factors
HZI73_12420 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TMF_TATA_bd
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QUI25703
UniProt:
A0A8J8MQM8
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All DBs
Position
2985180..2986517
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AA seq
445 aa
AA seq
DB search
MKIAFISLGCDKNLVDSEVMLGLLRDKGYTLISDQQDADVVVVNTCGFIKDAKEESIETI
IEMGQLKDKGKCQALIVTGCLAQRYQDELVKEMPEIDAILGVSNYDKVIDAVESVLHQKK
YVAFEDNDRMVETQTDRVLTSSSSYAYLKIAEGCDNHCTYCIIPKIRGKIKSRTIESLVQ
EAKYLVSNGVKELILVAQDTTKYGVDLYGHKKLPALLKELCKIDALKWIRLLYCYPEEIT
DELIDVMRDEQKVLHYLDMPIQHANNQILKRMARKGTQEKIEHVIKKLRTKIPDICLRTT
LITGFPGETHEQFEDMKTFVEDMQFDRLGVFTYSPEEDTPAATFEDQIDEELKETRKDAI
MAMQQHISRKINDDLIGCELEVMIEGYMPEDRVYCGRTYRDAPDVDGMVFVSCPYELLSG
DMVKVKISASNEYDLIGEISDEYCE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
attaagattgcgtttatttcactaggatgtgacaagaatcttgttgacagtgaagtgatg
ttaggtctattaagagacaagggctatacgctgattagcgaccagcaggatgcagatgta
gtggttgtaaatacctgtggatttataaaggatgccaaagaagaaagcatagagaccatt
attgaaatggggcagttaaaagacaagggcaagtgtcaagcattgattgtaacgggatgt
cttgcacagcgttatcaagatgaattggtaaaggagatgccagagatagatgctatctta
ggagtttctaattatgataaagtcattgatgctgtagagtctgtccttcatcagaagaaa
tacgttgcttttgaagacaatgaccgtatggttgagacgcagacagaccgtgttctcacg
tcatcaagctcttatgcttaccttaagattgcagaaggctgcgataatcactgtacctac
tgtatcattcccaaaatcagaggcaaaataaaaagtagaaccattgagagccttgtacaa
gaagctaagtacttagtcagtaatggtgtaaaagaacttatcctcgttgcacaagatacg
accaagtatggtgttgacttatatggtcataagaagttaccagctcttttaaaagaatta
tgcaagattgatgctctaaaatggattcgcttgttatactgttatccagaagagattaca
gatgaactgattgatgtgatgagagacgaacagaaggtccttcattatttggacatgcct
attcaacatgccaataatcagattctaaaaagaatggctcgaaaaggtacccaggaaaaa
atagagcatgtcatcaaaaaattaagaaccaagataccggatatttgtcttcgaacaacg
cttattacaggatttcctggtgaaacacatgaacagtttgaagatatgaagacatttgtt
gaagatatgcaatttgaccgtttaggtgtattcacatattcaccagaagaagatacacca
gcagcaacatttgaagatcagattgacgaagagctgaaagaaacgcgtaaagatgccatt
atggccatgcagcaacatatttcaagaaaaataaatgatgatttaatcggttgtgagtta
gaagtgatgattgagggctatatgccagaagatagggtttattgtggcagaacttacaga
gatgcaccggatgttgatggtatggtttttgtcagttgtccctatgagcttttatcaggt
gatatggtaaaagtaaaaataagtgcatccaacgaatatgatttaataggagagatttca
gatgaatattgcgaataa
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