Vibrio qinghaiensis: CCZ37_02870
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Entry
CCZ37_02870 CDS
T05259
Name
(GenBank) c-di-GMP phosphodiesterase
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vqi
Vibrio qinghaiensis
Pathway
vqi05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vqi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CCZ37_02870
Enzymes [BR:
vqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CCZ37_02870
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_8
PAS_9
PAS
Motif
Other DBs
NCBI-ProteinID:
ASU21598
UniProt:
A0A223MVK6
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Position
1:complement(588238..590286)
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AA seq
682 aa
AA seq
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MPSQHLQHWFAKITSNSPFFFAVLNDQHNYVMVNERYCDIAGLSTTELVGMNDSQILGEH
FYRHLKPYYERAFQGETLETELTLHEIDLETSLHFSLSPIMGDKKVENIVFHAIDTSEKQ
ILIRSLEESENKFSTLTSLLPDGLLLVDDDCIISANPASARLLGFENTSELLGEELSRLF
VDEKSKTVFSSPLSLLLTGAPLVCLTGPKCGFERKVQLHAGATVVLGNSSQLILIQDAED
APKQLSSTMHADIHIDSLTGLYNRFGFTKRLEQFIQNETPLVMLYLDIDNFKNINDSLGH
HIGDKVIKEVSARLKRLLPQQAIVGHLGGDEFGLILPDPENSRAAEMLAERIISLINQPF
DLHHFSKRLACSIGSVAYPGDGSDARVLLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYINPSAFIPVAEK
AGLIEHLGRVVMRDVFSTVKRWKLQGILPGRVAINLSPEQFCNPKLIDYMEKLLRTTELD
ANCITFELTESAVMSDSEHTLQMLNAIKKLGFSLSIDDFGTGYSSLSYLARFPIDELKID
RAFITDIDTLPKQITVIENIINLGKSLNLTVVAEGVETQQQATLLSNLNCNSIQGFHFYR
PQPRQEVEELFVQNRRHRSTPK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgcaacatttacaacattggtttgcaaaaatcacgtcgaacagtccgtttttt
tttgctgtcttaaacgatcaacataactatgtgatggtcaatgagcgctattgtgatatt
gcaggtttgagcacgaccgaattggttggaatgaatgactcacaaattctaggagagcat
ttctaccgtcatctaaaaccctattatgaacgagcatttcaaggagaaacgcttgaaact
gaactgacgcttcacgagatcgatttagaaacgagtttgcatttctctttatcgcctatc
atgggtgataaaaaagtcgaaaatattgtgtttcacgccatcgacacctccgaaaaacag
atcctcattcgctcattagaagagtcggaaaataagttttcaaccttgactagcttgctt
cccgatggattgttgctggtcgatgacgactgcattatctctgctaaccccgcatcggct
cgtttactcggttttgaaaatacctcagagcttcttggtgaagagttatcgcgcttgttt
gttgatgaaaaaagtaaaaccgtattcagctctccactcagtttattactcacaggggct
ccactagtctgcctcactgggccaaagtgtggctttgaacgtaaagttcaactgcacgct
ggagccaccgtcgtgctgggcaacagctcacaactgattttgattcaagatgcagaagac
gcacctaagcagttgtcttcgaccatgcatgctgatatccacattgactcgctgacaggc
ttgtacaatcgttttggttttactaaacgtttagaacagttcattcaaaatgaaacaccc
cttgttatgctctatttagacattgataacttcaaaaacatcaatgactctttaggccat
catattggcgataaagtcattaaagaggtctcagcacggctgaaacgtttactaccgcaa
caagccattgtgggccaccttggcggcgatgaatttggactaatactgcctgatcctgaa
aatagtcgcgccgctgaaatgttggctgaacgcatcatttctttgattaaccaaccgttt
gatctgcaccatttcagtaaacgtttagcctgctccataggtagtgtcgcctaccctggt
gacggtagcgatgcacgcgtattactgcaaaacgccgatacggcgatgtatgaagccaaa
gatcgtggtagaaaccgtttgattaagttcaacgatcaaatgaacaaagaagcgcgcatg
cgcttatggcttgaaattgaactgcaaaaagcgctgcagcaaaatggccttgaagtctgg
tatcaaccgaaagtgaatgctcgcgacttcagcatcaatggtgcggaagccttggtgcgc
tggaaacaccctgtagaagggtatatcaatccgagcgcttttattcctgtcgcggaaaaa
gctgggctgattgaacatttaggccgagtagtgatgcgtgatgtcttctcaaccgtaaaa
cgttggaagctgcaaggtattttaccaggtcgcgtggcgatcaatttatcgcccgaacag
ttttgtaacccgaagttgattgattatatggaaaaactgcttcgcaccacagagcttgat
gcaaactgcatcacatttgaactgaccgaaagtgccgtcatgagcgacagcgagcacacc
ttgcaaatgttgaacgcaatcaaaaaactgggtttttcgctgtccattgatgactttggt
acggggtattcctcgctctcttatctcgctcgcttcccgattgatgaacttaaaattgac
cgcgcttttataacggatatcgatacgcttcctaaacaaatcaccgtcattgaaaatatc
atcaatttaggaaaatcactcaacttaacggtcgttgccgaaggtgtggaaactcaacaa
caagccacactgctctctaatctcaactgtaactcaattcaaggcttccatttttatcgg
ccacaaccgaggcaggaagtagaagagttattcgttcaaaatcgtcgtcatcgttctact
cccaaataa
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