Vitis riparia (riverbank grape): 117908356
Help
Entry
117908356 CDS
T07274
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117908356
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117908356
04147 Exosome [BR:
vri04147
]
117908356
04090 CD molecules [BR:
vri04090
]
117908356
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117908356
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117908356
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117908356
CD molecules [BR:
vri04090
]
Proteins
117908356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_16
ABC_ATPase
AAA_30
AAA_22
Zeta_toxin
DUF87
RsgA_GTPase
AAA_21
SbcC_Walker_B
DUF815
DLIC
AAA_23
UPF0542
Motif
Other DBs
NCBI-GeneID:
117908356
NCBI-ProteinID:
XP_034677833
LinkDB
All DBs
Position
19:complement(23925893..23930183)
Genome browser
AA seq
1225 aa
AA seq
DB search
MGRNIGSVRSIFMHADAADYCLMAFGLLGAICAGLYRPTLLFVVNKIMNNIGSASTSGDA
FSHKINQNALILLYIACGSWVPFFLEGYCWSRTAERQAKRMRSRYMKALLRQDVEYFDLH
VTGTAEAISSVSEDSLVIQDVISEKVPNLLINAASFVGCYIVAFAMLWRLAIVGVPFVVL
LVIPGFIYGRALMNLARKMKEEYSKAATIAEQAISSIRTVYSFVGERKTQFAFSAALQGP
FKLGLRQGVAKGLVIGGNGVVLGIWAFMCWYGSRLVMYHGAQGGTVFATGAVMAIGGLSL
GPGLSNLQYLSEACTAGERIMEVIKRVPKIDSDNMEGQTLENLCGEVEFKHVQFAYPSSP
EITIFKDFSLKIPTGKKVALVGSSGSGKSTAVALLQRFYDPLGGEILLDGVAIDKLQLKW
LRSQMGLVSQEPSLFATTIKENILFGKEDATMEEVVAAAEAAHAHHFICELPDGYDTQVG
ERGVQMSGGQKQRIAIARAVIKAPRILLLDEATSALDSESERVVQEALDSAALGRTTIII
AHRLSTIRNADIIAVVQDGHIVETGPHDQLIQNPAGLYTSLVSLQQADQPWKVATSLTPA
TSLYLHTTSSNSTPPNSPLHSMPAGEEAATVTSDIPVPSFWRLLAMNRPEWKEASIGCLS
AVLSGAIQPLYAFSMGSMISVYFLPDHEEMKKHTRIYSVCFFALFVLSLLSNIFQHYSFA
AMGENLTKRVREMMFSKILSFEVGWFDQDDNSTGAICFRLAKDATVVRSLVGDRMSLLVQ
TFSAVTISGTMGLIIAWRLAMVMIAIQPLMIISFYTRTVLLKSMSAKAIKAQEESGKLAA
EAVSNLRTITAFSSQARILKMLEVAQEGPIQESTRQAWFAGIALGISQSLLSCSWALDFW
YGGKLLSQGYISSKAFLQTFMILVSTSRVIADAGSMTNDLAKGFDAIRSVFAILDRLTQI
QPENPDSYQPEKIRGQVQIQEVDFAYPARPNAFIFKGFSIDIDPGKSTALVGESGSGKST
IIGLIERFYDPLKGIVKLDGKDIRTYHLRVLRKHIALVSQEPILFAGTIRDNIAYGASSD
EINESEIIEAARAANAHDFIVALKHGYDTWCGSIGLQLSGGQRQRIAIARAILKNAAILL
LDEATSALDSQSETLVQEALERVTMGRTSVVVAHRLSTIQNCDLIAVVDKGNVVEKGTHT
SLLEKGPTGTYYSLVNRQRGLISPT
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atggggagaaatatcgggtctgtccggtccattttcatgcatgccgacgccgcagattac
tgtttgatggcttttggtttgctcggagccatctgtgctgggctttataggccgactctt
ttgtttgtggtcaacaagattatgaacaatatcggcagtgcctccacttccggtgatgcc
ttctcccataaaatcaatcagaatgccctgatactgctgtacattgcttgtgggtcatgg
gtgccttttttccttgagggttattgctggtcaagaactgccgagagacaagctaaaagg
atgagaagtagatatatgaaagcactgttgaggcaggacgtggagtattttgatttgcat
gtgaccggcacagcagaggccatcagtagcgtctccgaggatagtctcgtgattcaagac
gttattagcgaaaaggtcccaaacttgttgataaacgctgcatcttttgtagggtgctac
atagtagctttcgctatgctgtggaggcttgctattgtaggcgttccctttgtcgttctg
cttgtgattcctggtttcatatatggacgtgcactgatgaacctggccaggaagatgaag
gaagagtacagcaaggctgccacaatagcagagcaggccatctcttctataagaactgtt
tactccttcgtgggagagagaaaaactcagtttgccttctctgcagctctgcaaggcccc
tttaaattgggtctgcgccagggtgtggccaagggtttggtcattggcggcaatggggtg
gttcttggaatatgggcgttcatgtgttggtacggtagtagattggtgatgtatcatggc
gctcaaggaggaaccgtttttgctactggggctgtcatggccattggtggattatcacta
ggccccggattatccaaccttcagtacttgtcggaagcatgcaccgcgggcgagcgaata
atggaggtgataaaaagggtcccaaagatagattctgacaacatggaaggccaaaccttg
gaaaacctgtgtggggaagtggaattcaagcacgttcaatttgcatatccgtcatcccca
gagataacaatctttaaagatttcagcctcaaaatcccgacgggcaaaaaggtggcgttg
gtgggtagcagcgggtcgggaaagtccacagcagtagctttgctgcagaggttttatgac
ccccttggtggggagattctgcttgatggggtcgccattgataagctacaactcaagtgg
ctaaggtcgcagatggggttagtgagccaagaaccatcactttttgccaccaccattaaa
gagaacatacttttcggcaaggaagacgctaccatggaagaagtagttgctgcagccgaa
gctgctcatgctcatcattttatttgtgagttgcctgatggatatgatactcaagtgggg
gagagaggagttcaaatgtccggagggcagaagcagagaatcgccattgcaagagcagtc
atcaaagccccgcgaatactcctcctagacgaggcaaccagcgctcttgactccgagtcc
gagcgagtggtccaagaggcgcttgacagcgctgcccttggccgcacaaccatcatcatc
gcccaccgcctgtccaccatccgtaatgccgacattattgctgtggtacaggatggtcac
atagtagagaccggccctcatgaccaactcatccaaaaccccgctggactctacacttcc
ctggttagcctccagcaagccgatcagccatggaaggttgcgacatccttaacccccgcc
acctccctgtatctccataccactagcagcaactccactccccccaactcccctttacac
agcatgcccgcaggagaagaagctgccactgttacctcggacattccagtgccgtcgttc
tggagactgctcgcaatgaaccgtcctgagtggaaggaagccagcataggatgtttgagc
gcggttttgtccggtgcgattcagccgctctacgcattctccatgggatcaatgatatcc
gtatatttcttacctgaccatgaggagatgaagaagcataccagaatttattctgtgtgt
ttttttgcattgtttgtgctctcgttgctgtcaaatatcttccaacattacagttttgct
gcaatgggagagaatttgacaaagagagtaagagagatgatgttctccaagattcttagt
tttgaagtggggtggttcgaccaagacgacaactccaccggtgctatctgcttcagactt
gccaaagatgcgactgtggtaagatcattagtgggtgatcgaatgtcacttctcgtccaa
accttttcagctgtgaccatctcgggcacaatgggtctgatcatcgcgtggagattggct
atggtcatgattgcaattcaacccctcatgattatctcattctacacccgaacggtgcta
ctcaaaagtatgtctgccaaggcaatcaaggcccaagaagaaagcggcaaactcgccgct
gaagctgtctccaaccttcgcaccatcactgccttctcatcccaggcccgaattcttaaa
atgctggaggtcgcccaagaaggacccatacaggagagtacacgccaggcctggttcgca
ggaatagctttaggaatctcccaaagtctcttgtcatgtagttgggctcttgacttctgg
tacggtggcaaattactctcccaagggtatatttcatcaaaagcattcttacagactttt
atgatcctagttagcacaagtcgtgtcattgcggatgcaggaagcatgaccaatgacctt
gccaagggcttcgatgctattcgctccgtttttgccatccttgaccgcctcacccaaatc
caacctgaaaacccagatagctaccaacccgaaaaaataagaggtcaagttcaaattcaa
gaagtggacttcgcttatccagctaggcccaacgcctttatctttaagggtttctcaatc
gacatagatcctgggaaatcaactgcattggtaggagagagtgggtcaggcaaatcaacc
atcattgggttgatagaaagattctacgatcccctcaaaggaattgtcaagcttgatgga
aaagatataaggacctaccacctcagggtcctacggaaacatattgcactagtcagccag
gagcccatattgttcgctggcaccataagagacaacattgcctatggcgcatcatcagat
gaaatcaacgaatcagagatcatcgaggctgcaagggcagccaatgctcacgatttcatc
gttgcactcaagcatggctatgatacatggtgtggtagtatagggctacaattgtctggt
gggcagaggcaacggattgctatagctcgggccattttgaaaaacgcagcaatattgtta
cttgatgaagcaacgagcgcactagatagccaatcagagacactggtgcaggaagcttta
gagcgtgtgacaatgggacggacgagcgtggtggtggcccacaggttgagtaccatacag
aattgtgatttgattgccgttgtggataaaggaaacgtggtggagaaggggacccacaca
tccttgttggaaaaaggccctactgggacctactactcactggtgaaccgacaaaggggc
ctaatatcaccaacatag
DBGET
integrated database retrieval system
