KEGG   Vitis riparia (riverbank grape): 117908956
Entry
117908956         CDS       T07274                                 
Name
(RefSeq) polynucleotide 3'-phosphatase ZDP
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117908956
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:vri01009]
    117908956
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vri03400]
    117908956
Enzymes [BR:vri01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     117908956
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     117908956
Protein phosphatases and associated proteins [BR:vri01009]
 HAD phosphatases
  Other HAD phosphatases
   117908956
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     117908956
SSDB
Motif
Pfam: PNK3P zf-PARP Hydrolase Hydrolase_6 Hydrolase_like
Other DBs
NCBI-GeneID: 117908956
NCBI-ProteinID: XP_034678710
LinkDB
Position
19:1758635..1765778
AA seq 354 aa
MSSSSSSKVVVEYAKSNRSSCKICSKTISANAVRLGMVTRGARGFDMTKWHHVQCFSAGS
ESISSAEMIQGFASLKSSDQEALKKLVDGFAKSLDEVLDEGKDLTEGNKEMICLELGVHK
RDEDEKDKREERDSKKTKISAPALKAEQEIAFAVSDIKDKYKDATLLPKWKAFQTVIFLE
RDDDLHDSKKIAAFDFDGCLAKTSVKRVGPDAWSLMYPSIPDKLQSLYNDGYKLVIFTNE
SNIERWKNKRQVAVDSKIGRLNNFIKCVKVPIQVFISCGFDKSDGQAEDPFRKPKPGMWR
IMEQHFNSGISIDMDQSFYVGDAAGRLNDHSDADIKFAQAIGLKFYVPEEYFDA
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgtcgtcgtcctcttcatcaaaagttgtcgtggagtacgccaagtcgaatcggtcttcg
tgcaagatatgttccaaaacgatctctgcaaatgctgtgaggttggggatggtgaccaga
ggcgcgcgaggcttcgatatgaccaagtggcatcacgtgcaatgcttttcggctggttcc
gagtcgatttcctccgccgagatgatacaagggtttgcttctttgaagagcagtgaccag
gaagctcttaagaaattggttgatgggtttgcaaagtctctggatgaggtcttggatgaa
ggtaaagacttaactgaaggaaacaaagaaatgatttgtctggaattgggggtgcataaa
agagatgaagatgaaaaagataagagggaagaaagggattcaaagaaaacaaagatatct
gcacctgctctgaaagctgagcaggaaatagcctttgcagtttctgatatcaaggacaag
tataaggatgctacactactgccaaaatggaaagcattccagacagtaatttttcttgaa
cgggatgacgatcttcacgattcaaaaaaaattgctgcattcgattttgatggatgtctt
gccaaaacatctgtgaaaagagtaggtccagatgcttggtcccttatgtatccttcaata
ccggacaagttgcagagcttgtataatgatggctacaagctggtaatctttaccaatgaa
tccaacatagagcgctggaagaataagagacaggtagcagtggactcaaaaattgggcgc
cttaacaatttcatcaagtgtgtcaaggttccaattcaggtttttatatcctgtgggttt
gataaatctgatggtcaagcagaagacccctttcgcaagcccaaacctgggatgtggcgg
attatggagcaacacttcaactctggcatttcgattgatatggatcaatccttttatgtt
ggagatgcggctgggagactaaatgaccacagtgatgctgatattaaatttgcacaggca
attggactaaagttttatgttcctgaggaatactttgatgcgtaa

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