Vitis riparia (riverbank grape): 117913834
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Entry
117913834 CDS
T07274
Name
(RefSeq) ABC transporter B family member 11-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117913834
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117913834
04147 Exosome [BR:
vri04147
]
117913834
04090 CD molecules [BR:
vri04090
]
117913834
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117913834
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117913834
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117913834
CD molecules [BR:
vri04090
]
Proteins
117913834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
AAA_16
RsgA_GTPase
AAA_21
Zeta_toxin
AAA_15
DEAD
SbcC_Walker_B
DUF815
AAA_30
Arif-1
Motif
Other DBs
NCBI-GeneID:
117913834
NCBI-ProteinID:
XP_034684777
LinkDB
All DBs
Position
5:2231464..2238039
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AA seq
1294 aa
AA seq
DB search
MAGENGWRGGINTEQATASTSHSSVMEIEKVPNNTDSKQETDTNREKEESTRTVPFCKLF
SFADSWDYLLMFVGAVGAAANGVSAPLMTILFGDVINSFGKDSNSKDMVHEVSKVSLKFV
YLAIGTGVASFLQVTCWMLTGERQAARIRSLYLKTILRQDVGFFDKFTNAGEVVGRMSGD
TVFIQDAMGEKVGKFIQLMATFLGGFIVAFCKGWLLTLVMLSCFPPLVIVGAFTTIFITK
MASRGQAAYSVAAVVVEQTIGSIRTVASFTGEKQAIAKYNQSLSKAYTSGVQESVISGLG
FGLFMFVLFASYALAMWFGSKMIIDKGYTGGAVMNILFSVVAGSMSLGQASPCLSAFGSG
QAAAFKMFETIERKPEIDAYSSDGQKLDDVQGDVELRDVYFSYPTRPDEQVFKGFSLSIP
SGTTAALVGESGSGKSTVISLIERFYDPQAGEVLIDGINLKEFQLRWIRGKIGLVSQEPV
LFTSSIRDNIAYGKDGATIEEIRAAAELANASKFIDKLPQGLDTLVGEHGTQLSGGQKQR
VAIARAILKDPRILLLDEATSALDAESERVVQEALDRVMINRTTVIVAHRLSTVRNADMI
AVIHQGKIVEKGAHSELIKDPDGAYSLLIRLQEISSEQNASHDQEKPEISVDSGRRSSKR
MSLLRSISRSSSIGQSSRHSFSMSFGVPPDISIIETAPDGQDPAPLEHPPKVPLGRLAYL
NKPEIPFLLLGTIAAVVNGAVFPVFGILISSIIKSFFKPPHELRKDARFWALMFVVLGLV
SFSSLSLRSYLFSTAGFKLIRRIRAMCFEKVVYMEVSWFDEADHSSGSIGARLSADAAMV
RSLVGDALSLLVQNSAAMIAGLVLAFVANWKMSFIILVLLPLFGANGYVQVKFLKGFTAD
AKKKYEEASQVANDAVGSIRTVASFCAEEKVMQLYQQKCEGPMNAGVREGLVGGVGYGVS
FFLLFAVYATAFYAGARLVDVGQATFAEVFQVFFVLTLAAVGVSQSSSLAPDTGKAKNAA
ASIFAILDRESKIDSSDESGTTLENVKGEIEFHHVSFRYPTRPDIQIFRDLCLAIHSGKT
VALVGESGSGKSTAISLLQRFYDPDSGHITLDGVEIQKLQLKWFRQQMGLVSQEPVLFNE
TIRANIAYGKEGNATEAEISAAAELANAHKFISGLQQGYDTTVGERGIQLSGGQKQRVAI
ARAIVKDPKILLLDEATSALDAESERVVQDALDRVMVNRTTLVVAHRLSTIKGADLIAVV
KNGAIAEKGKHETLINIKDGIYASLVALHMSASS
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctggggagaatggttggagaggaggcataaacacagagcaggccacagcttcaaca
agtcattcatcagtgatggagatagagaaagtcccaaacaatacagatagtaaacaggag
acagacacaaacagggaaaaagaagaaagtactcgaacagttccattctgcaagctgttc
tcatttgctgactcctgggattatctattgatgtttgtgggcgcagtcggtgctgctgca
aatggggtatccgcgcctctaatgaccatactctttggagatgtaatcaattcttttgga
aaagactcgaactccaaagatatggttcatgaagtttccaaggtttctctgaagtttgtg
tacttagcaattgggactggagttgcatcatttcttcaggtgacttgctggatgctcaca
ggtgagagacaggcggcacgaataagaagtttgtacttgaaaactatattgaggcaagat
gttggcttctttgataagttcactaatgctggagaagttgttgggaggatgtctggtgac
acggtttttatccaagatgccatgggtgagaaggttggaaagtttatacagttgatggca
acgttcttgggaggctttattgtagctttctgcaaggggtggcttctcacccttgtcatg
ttatcatgttttccacctctcgtcatcgtcggtgctttcacgaccatctttataaccaag
atggcatcccgcggacaagctgcatattcagttgcagcagttgtagtagaacagacaatt
ggctcaatcagaactgttgcttcttttactggggaaaagcaagccatagccaaatacaac
cagtctttgtccaaagcctacacatccggtgtgcaagagtccgtgatttcagggctaggt
tttggattgtttatgtttgtcttattcgcaagttatgctttggccatgtggtttggttcc
aaaatgataattgataaaggatacacaggaggggctgtcatgaatatacttttttctgtg
gtggctggctccatgtctctagggcaggcatctccatgcttgagtgcatttggctctgga
caagctgcagcatttaagatgtttgagacaatagaaagaaagccagaaatagatgcctac
agcagtgatggacagaaattggatgatgttcagggagatgtggaactaagggacgtttat
ttcagttatccaacaaggccagatgaacaagtatttaaaggattctcactttcaatacct
agtggtacaactgcagccttggttggagagagtggaagtgggaaatcgactgtgatcagt
ttgatagagaggttttatgacccgcaagctggtgaagttcttatagatggtatcaatctc
aaggaatttcagctgagatggatcagaggtaaaataggccttgtcagccaggaaccggtt
ctgttcacttctagcattagagataacatcgcctatgggaaggatggagctactatagaa
gaaataagggctgctgctgagcttgccaatgcttctaaattcatagataaactccctcag
ggactagacacactggttggtgaacatggaactcagctgtccgggggccaaaagcagaga
gttgctatagccagagcaattctcaaggacccgagaattctacttctagatgaagctaca
agtgcccttgatgcagaatctgaaagggttgtgcaagaggcattggacagagttatgatc
aaccgaactaccgtcatcgtagcccatcgtttgagtacagtgaggaatgcagacatgatt
gctgttattcatcaaggaaaaattgttgaaaaaggagcacactctgagctaatcaaggat
cctgatggggcatacagtctgcttataaggttgcaagaaattagctcagaacagaatgct
tcacatgatcaggaaaaaccagagatctctgtggattcaggaagacgttcaagtaagcgg
atgtctttgttacgatctataagccgatcatccagcattggacaaagcagccgccactct
ttctctatgtcatttggtgtaccccctgacatcagcatcatagaaacagcacctgatgga
caagatccagcaccattggagcatccccctaaagtcccgcttggtcgcttggcctatctt
aacaagccagaaattccatttcttctacttggtaccatagctgcagttgtcaatggtgca
gtatttccagtttttgggatactgatctcaagcataataaaatctttcttcaagccccca
catgaactcaggaaggatgctagattttgggcactgatgtttgttgttcttggtctggtg
tccttttcttctttgtcattaaggtcttacctattttcaacggcggggtttaagttaata
agaaggataagagcaatgtgctttgagaaagtagtttacatggaagtaagttggttcgat
gaagctgatcactcgagcggttcaattggcgcaaggctttctgcagatgcggccatggtg
agaagtctggttggagatgccctctctttgcttgtacagaacagtgcagcaatgattgct
ggcttggttcttgcctttgtagcaaactggaaaatgtcttttatcatccttgtgttgcta
cctctatttggagctaatggatacgttcaagtgaagttcctgaaaggttttactgcagat
gcaaagaaaaagtatgaggaagcaagtcaagtagccaatgatgcagttgggagtataaga
acagtcgcttctttctgtgctgaagagaaagtgatgcagctataccagcagaaatgtgaa
ggccccatgaatgcaggggtaagggaagggttagttggtggggttggttatggggtatcc
ttcttcttgctgtttgctgtctatgcaactgccttttatgctggcgctcgactggttgat
gttgggcaggcaacattcgctgaggtttttcaggttttctttgttctcaccctggcagct
gttggagtctctcaatcaagctccctcgctcctgatacaggcaaagccaagaatgcagct
gcttcaatatttgcgattcttgaccgtgaatcaaaaatagactctagtgatgaatcagga
acaacattagaaaatgttaaaggagaaattgagtttcaccatgtcagtttcagatatccc
actagaccagacatacagattttccgtgatctttgcttggcaattcactctggcaagaca
gttgctctggtcggagaaagtgggagtggtaaatcaacagcaatctcactgttgcagaga
ttttatgacccggattcaggtcatatcactctggatggagtagagatccaaaagctacag
ttgaagtggttcaggcagcaaatgggtctagttagccaggagcctgtgttattcaatgag
accatccgagccaacatagcatatggtaaagaagggaatgcaacagaagcagaaatttca
gctgcagcagaattagcaaatgcccacaaattcatcagtggtttacaacagggctatgat
acaactgttggagagagaggaattcagttgtctggaggacagaaacaaagagtggcaatt
gctcgggctatagtgaaggatccaaagatactactcttagatgaagctaccagtgctctt
gatgctgaatctgaaagggtggttcaggatgcactggaccgagttatggtgaacagaacc
acactagttgtggctcatcggttgtccacgatcaagggtgcagacttaattgctgtggtt
aaaaatggagccattgcagagaaaggaaagcatgagactttgattaacattaaggatgga
atttatgcctcattggtagcactgcatatgagtgcttcatcttag
DBGET
integrated database retrieval system
