Vitis riparia (riverbank grape): 117920446
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Entry
117920446 CDS
T07274
Name
(RefSeq) phosphatidate phosphatase PAH1 isoform X1
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00561
Glycerolipid metabolism
vri00564
Glycerophospholipid metabolism
vri01100
Metabolic pathways
vri01110
Biosynthesis of secondary metabolites
Module
vri_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
117920446
00564 Glycerophospholipid metabolism
117920446
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
vri01009
]
117920446
Enzymes [BR:
vri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
117920446
Protein phosphatases and associated proteins [BR:
vri01009
]
HAD phosphatases
Other HAD phosphatases
117920446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
Lipin_mid
APP1_cat
Motif
Other DBs
NCBI-GeneID:
117920446
NCBI-ProteinID:
XP_034693871
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All DBs
Position
8:complement(13945395..13966645)
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AA seq
921 aa
AA seq
DB search
MNVVGRVGSLISQGVYSVATPFHPFGGAVDVIVVQQQDGTFRTTPWYVRFGKFQGVLKGA
EKIVRISVNGVEANFHMYLDNSGEAYFVREVSSEGKGTNGIIKESDGLEVIDDSSKDNGD
NGDNVTVNICKLESSVSDPGVVQIRDECASSGSWLERVESDNDRRFYEFQDDESSHEGSV
ELSEYGSNQYESFDHVGHFGESRALDSEVVLVSVDGHILTAPISSSEGNPENLQLSTPQF
HLGPGEGTDFCEGNEEFSAGEGPWAAGYLNELDSASANVDSQNVCSVNNDNSAFGHQLEV
CEGEKENASLADRTQDVATQGRGPSIQSNLEDKNTSIERKDVFRSCLELTELATQVVNGD
IRHLNSSLKVQEGMENSQEKSPQCLRAVDDSEHGHVVQFSNDDELSSCNPESPWNTTSPD
LCVEVEPNEKNELSMEHIESDNMSVPSVRNDPEWKDEQFGMLAVEGTNGSPQRPAPEDAC
SKSEIVETQATISCEGIQTDSSIRFEISLCGKELRAGMGLDAAAEAFEAQRISEEEFKTS
APSIIKNENLIIRFREKYLTWDKAAHIVLGMAAFGLDLPVEHKDAIPVEQDETPKARGGD
SKIAATSSGRRWRLWPIPFRRVKTLQHTDSNSSSEDVFVDSESGSQSTHVEPIPPSPGGS
ETPKKQLGRTNIPTTEQIASLNLEEGQNMVTFSFSTRVLGTQQVDAHIYLWKWNARIVIS
DVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRSFL
LNLKQDGKALPNGPVVISPDGLFPSLYREVIRRAPHEFKIACLEDIRALFPSDYNPFYAG
FGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDVKSYTSLHTLVNDMFPPTSLVEQ
PLQEDFNSWNFWKMPLPDIEL
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggttggtagagtcgggagcttaatttcacaaggtgtttactctgttgccact
cccttccatccctttggtggggccgttgatgtaattgttgttcagcagcaagatgggacc
ttccgaaccacaccttggtatgttaggtttggtaaatttcagggtgttctcaaaggtgca
gaaaagatagttcgcatcagcgtcaatggtgtggaagccaatttccatatgtatcttgat
aattctggagaagcttattttgtcagggaagtttctagtgaaggtaagggaacaaatggg
attataaaggagtcagatggtttagaagttattgatgatagtagcaaagacaatggtgac
aatggtgacaatgttactgttaatatttgtaaacttgagagtagtgtttctgatcctggt
gtggttcaaattagagatgaatgtgcttcctctggtagctggcttgagagagtggaatct
gataatgaccgtaggttttatgaattccaagatgacgaatcctctcatgagggctcagtt
gagttgtctgaatatggatctaatcaatacgagagttttgaccatgtaggtcattttggg
gaatcacgggctttggattcagaagtggtgttggtgagcgtggatggtcatatactgacg
gcacccatctcctcatcagaagggaatcctgaaaatctgcaattaagcacacctcagttt
catttgggccctggtgaagggactgacttttgtgaaggtaatgaggagtttagtgcaggt
gaaggtccatgggctgctggttatctcaatgagctggactcagcttcagctaatgttgat
tctcaaaatgtttgcagtgtgaataatgataacagtgctttcggtcatcagttagaagtt
tgtgaaggagagaaggaaaatgcctctctagctgacagaacccaggatgttgcaacccag
ggaagaggtccttccatacagagtaatttagaagataaaaataccagtatagaaaggaaa
gatgtttttaggagctgtttggaactaacagaattggcgacgcaggttgtgaatggtgat
atcagacatcttaattcttcattgaaggtccaagaaggcatggaaaattcacaagaaaaa
tcacctcaatgccttcgagcagttgatgactctgaacatggtcatgttgttcaattcagt
aatgatgatgagttatcttcctgtaatcctgaatctccttggaacactacatctccagat
ctatgtgttgaagttgaacccaatgagaaaaatgagttgagcatggaacatattgaatcg
gacaacatgtctgttccttctgtgcgtaatgatccagaatggaaggatgaacagtttggt
atgctggcagtggaagggacaaatggtagcccacaaagacctgcaccagaagacgcatgt
agtaaaagtgagatcgtggaaactcaagcaacaatatcttgtgaagggatacaaacagat
tcaagcataaggtttgagatctctctttgtgggaaggaacttcgtgctggtatgggtttg
gatgctgctgctgaagcctttgaagcacagcgcatctctgaggaggaatttaaaacttct
gcaccatcaattattaagaatgaaaacctaattattagatttagagagaagtacttgaca
tgggataaagctgctcacatcgttcttggaatggctgcattcggtttagatttacctgtt
gagcacaaagatgcaattcctgtggaacaggatgagacaccaaaggccaggggtggtgat
tctaaaattgcagccacttcttctgggcgtagatggaggctctggcctattccttttaga
agggttaaaacccttcagcacactgacagtaactcatcaagtgaagacgtatttgttgat
tctgaatctggctcacaaagcacacatgtagaaccaatcccaccatcccctggtggtagt
gagactccgaagaagcaacttggaaggacaaatatccccaccactgagcagattgcatct
ttgaacctagaagaaggtcaaaatatggtaaccttcagtttctctaccagggttctagga
acacaacaggttgatgctcatatttacttatggaagtggaatgcaagaattgtaatttca
gatgttgacgggacaattaccaagtctgatgttctaggtcagttcatgcctttagtcgga
aaagattggactcaatctggggttgctcgacttttctcggccattaaggagaatggatat
cagctactctttctcagtgcacgagcaattgttcaggcatatctaactagaagttttcta
ctcaatctcaaacaggatggaaaagctttacctaatgggcctgttgttatttcacctgat
gggttatttccttcattataccgagaagtaattagaagagcgcctcatgaatttaagatt
gcgtgtttagaggatattagagcactttttccttctgattacaatccattctatgctggt
tttggaaatagagacacagatgagctcagttataggaagattgggatcccaaagggcaaa
atatttatcatcaaccctaagggtgaagtggccattagtcatcggattgatgtgaaatcc
tacacctctttacacactctcgtcaatgacatgtttcccccaacttcattggtagaacag
cctttgcaggaagattttaactcgtggaacttttggaaaatgccattgccagacattgag
ttatag
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