Vitis riparia (riverbank grape): 117922144
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Entry
117922144 CDS
T07274
Name
(RefSeq) beta-galactosidase 17
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri00052
Galactose metabolism
vri00511
Other glycan degradation
vri00531
Glycosaminoglycan degradation
vri00600
Sphingolipid metabolism
vri00604
Glycosphingolipid biosynthesis - ganglio series
vri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
117922144
09103 Lipid metabolism
00600 Sphingolipid metabolism
117922144
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117922144
00604 Glycosphingolipid biosynthesis - ganglio series
117922144
00511 Other glycan degradation
117922144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vri04147
]
117922144
Enzymes [BR:
vri01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
117922144
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117922144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
Glyco_hydro_42
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
117922144
NCBI-ProteinID:
XP_034696067
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All DBs
Position
9:complement(2023513..2039684)
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AA seq
708 aa
AA seq
DB search
MQRLSGRRASSLRTEASSWSGLLTMARKRSSRTTFFLLSLLFLAAFTLFAPLPSLSSLSP
PLPTSSPIRVIGQKFEIKNDKFWKDGQPFQIIGGDLHYFRVHPEYWEDRLLRAKALGLNT
IQTYVPWNLHEPRPGKLVFEGIADIVAFLKLCQKLDFLVMLRPGPYICGEWDLGGFPAWL
LAVNPPLRLRSSDPAFLRLVDRWWGNLLPQIAPLLYDKGGPIIMVQIENEYGSYGDDKAY
LHHLVAVARRHLGNDLILYTTDGGSRETLAKGTIRGDAVFSAVDFSTGDDPRPIFQLQKE
YNAPGKSPPLCAEFYTGWLTHWGENIASTGADFTAAALDKILSLKGSAVLYMAHGGTNFG
FYNGANTGADELDYKPDLTSYDYDAPIRESGDVDNAKFKALRGVVKRHSAASLPSVPSNT
EKRGYGPIQLQKTESLFDLIDKIDPIGVVESENPTSMESVGQMFGFLLYTSGYAAKDQGS
NLFIPNVHDRAQVFISCPSEDNGGRPTYVGTIERWSNQNLSLPDTKCASKINLFVLVENM
GRVNYGSHLFDQKGILSPVYLDGNVLKSWKIVAIPFQNLNEVLDIKPIKEIAHSRINKTL
ALTNIKNTEEVSIEPALYAGRFVVDETKDTFISFSGWGKGIAFVNEFNIGRFWPSTGPQC
NLYVPAPVLRHGENNLVIFELESPNSELVVHSVDHPDFTCRSSSSSLL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggttgagtgggagacgagccagcagtctccgtacagaggcgtcaagctggtca
gggttgttgacaatggccaggaagcgaagctccaggaccaccttcttcctcctgtctctt
ctcttcctcgctgccttcactctcttcgctcctctcccttccctctcctctctctcccct
cccctccctacttcgtctccgatcagggtcattggtcaaaagtttgagatcaagaacgac
aaattttggaaagatggtcaacctttccagattattggtggtgatttgcattatttccgg
gttcatcctgagtactgggaagataggctgttgagagcaaaggcattgggcttgaatacc
attcaaacttatgttccttggaatctgcatgaaccaagacctggaaaactggtttttgag
ggtattgcagatatagttgcatttctcaaactctgtcagaagctggattttcttgttatg
cttcgaccaggaccttatatatgtggagagtgggatttgggggggtttcctgcctggctg
cttgccgttaatccgcctctcagattaagatcatcggatcctgccttccttcgtttggtt
gatagatggtggggaaatctacttccacagatagctcctcttctttatgacaaaggaggc
cctattataatggttcagattgaaaatgaatatggttcatatggggatgataaagcttat
cttcatcacctggttgcagtggccagaagacaccttgggaatgatctaatattgtatact
acagatggaggttctagggaaactcttgcaaaaggcaccattcgtggagatgctgtcttt
tcagctgttgacttctcaactggtgatgatccacgccctatatttcagttgcaaaaggag
tacaatgcaccaggaaagtctccacctctctgcgcggagttctatacaggttggcttaca
cactggggggagaatattgcaagtactggtgctgattttacagccgctgctcttgacaaa
attttgtctctgaagggttccgctgtgctttatatggcacatggtgggacaaactttgga
ttttacaatggtgccaatactggtgcagatgagttggactacaagcctgaccttacttcc
tatgattatgatgcaccaattagagaatctggtgatgtggacaatgcgaagttcaaagca
ttgcgaggggttgtgaagcgacacagtgcagcatctcttccttcagttccttccaacact
gaaaagagaggatatggacccatccagttacagaaaactgaatctttgtttgatttaatt
gataaaatagatcctattggtgtggttgaatctgaaaatccaacttcaatggagtctgtg
ggacagatgtttggatttttattatatacatcaggatatgcagcaaaggaccaaggaagc
aatttgttcataccaaatgtgcatgatagagctcaggtttttatttcatgcccttctgaa
gataatggtggaagaccaacatatgtaggtacaattgaaagatggtcaaatcagaacctg
agccttcctgatactaaatgtgcttccaaaatcaacttatttgttttagttgaaaacatg
ggacgtgtaaattatgggtcacacttgtttgaccagaagggtattttgtctcctgtttat
ctggatgggaatgttctgaagagttggaagattgttgcaattcctttccaaaacctgaat
gaggtgttggatatcaagcccatcaaggagattgcacattccagaatcaataaaacattg
gcccttacgaatataaaaaatactgaggaggtttccatagaaccagcactctatgctggc
cgttttgtagttgatgaaacaaaagacacattcatatcattcagtggatggggtaaaggg
atcgcatttgtcaatgaattcaacataggaagattttggccgtcaactggaccacagtgc
aacctctatgtccctgctccagtgcttagacatggggaaaacaatctggtcatctttgaa
ttagaatcaccaaactctgagcttgtggttcactcagttgatcatccagacttcacatgc
cgttcaagcagttctagcttgctctga
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