Vitis riparia (riverbank grape): 117924335
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Entry
117924335 CDS
T07274
Name
(RefSeq) ABC transporter B family member 9-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
117924335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vri02000
]
117924335
04147 Exosome [BR:
vri04147
]
117924335
04090 CD molecules [BR:
vri04090
]
117924335
Enzymes [BR:
vri01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
117924335
Transporters [BR:
vri02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
117924335
Exosome [BR:
vri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117924335
CD molecules [BR:
vri04090
]
Proteins
117924335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_15
AAA_16
AAA_30
DLIC
DUF815
AAA_25
Motif
Other DBs
NCBI-GeneID:
117924335
NCBI-ProteinID:
XP_034698838
LinkDB
All DBs
Position
10:complement(14903937..14910809)
Genome browser
AA seq
1269 aa
AA seq
DB search
MGEDGEAQAKAPARGRKADEEKVPFYKLFSFADKLDVGLMVVGTVCAMANGMTQPLMTLI
FGQLINTFGDSDPSHVVHEVSRVSLKFVYLAIGSGIASLLQVSSWMVTGERQATRIRGLY
LKTILRQDIAFFDTETTTGEVIGRMSGDTILIQDAMGEKVGKFIQLMSTFLGGFIIAFAR
GWLLSLVLLPSIPLLVISGGTMAIIMSRMSSRGQLAYAEAGNVVEQTVGAIRTVASFTGE
KKAIKNYDNKLHIAYASTVQQGLASGIGLGTVLLIIFGTYGLAMWYGSKLVIERGYDGGR
VINCIMAIMSGGMSLGQTSPCLNAFAAGQAAAYKMFETIKRKPQIDAYDTSGTVLEDIRG
EIELKDVYFNYPARPDVQIFSGFSLHVPSGKTAALVGQSGSGKSTVISLLERFYDPHSGE
VLIDGVDLKQLQLKWIREKIGLVSQEPILFATTIKENISYGKEDASDEEIRTAIVLANAA
KFIDKLPKGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRILLLDEATSALDAESERIVQ
DALVNVMVNRTTVVVAHRLTTIRNADIIAVVYQGKIVEQGTHGALIKDPDGAYTQLVHLQ
EGNSQAEDPHMEDTDKLDKSPDNMDNSIARSGSHRLSSWRSMSRGSSSGRSSVSLSFSVP
FPIGIPATEMAGQDIERRDGEDEKRRKVSLRRLAYLNKPEGPVLLLGSIAAGIHGVIFPI
FGLLLSTAIKIFFEPPNELKKDSRFWALMFVGLGVLTLMVVPVQNYFFGVAGGKLIQRIR
SLSFEKVVHQEISWFDDPANSSGAVGARLSTDASSVRSLVGDALALVVQNLTTVIAGLVI
SFTANWILALIILAVLPLVFLQGYFQMKFVKGFSADAKVMYEEASQVANDAVGSIRTVAS
FCAEKKVMDMYQQKCDAPMKQGVRLGLVSGAGFGFSFFALYCTNAFCFYIGAILVQHGKA
TFGEVFKVFFALTISAIGISQTSAMAPDTNKAKDSTATIFQLLDSKPMIDSSSNEGTTLA
NVKGDIEFQHVSFKYSTRPDVQIFRDLSLSIPSGKTVALVGESGSGKSTVISLIERFYNP
ESGRILLDGMEIQKLKLSWLRQQMGLVGQEPVLFNETIRANIAYGKEGATEDEIIAATKA
ANAHNFIHSLPQGYETSVGERGVQLSGGQKQRIAIARAILKDPKILLLDEATSALDAESE
RVVQEALDRVMVERTTVVVAHRLTTIKGADIIAVVKNGVIAEKGSHEELMSITDGPYASL
VALHTTSST
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggatggagaagctcaggccaaggcgccggcgagggggaggaaggcagatgaa
gagaaggttcccttttacaagctcttctcctttgcggacaaactagacgtggggttgatg
gttgtagggacagtgtgcgccatggccaatggcatgacgcagcccctcatgacacttata
ttcggtcaacttatcaacaccttcggcgactctgatccttcacatgtcgtccatgaagtc
tccagggtatccttaaagtttgtatacttggctattggttcgggcatcgcttctctccta
caggtgtcgagctggatggtaacaggggaaagacaggcaacgcggattcgaggattgtac
ttgaaaacaatattgagacaggacatagcattctttgacactgaaaccacaactggagag
gtcattggaaggatgtctggagacacgattcttattcaagatgccatgggtgaaaaggtg
gggaagttcatacaactaatgtcaacttttttgggcggcttcataattgcctttgcaaga
ggatggcttctctcccttgttttgcttccaagcattccccttctggtgatttcgggtggg
accatggcgattatcatgtcaagaatgtcaagccgtgggcaactagcttatgcagaagct
ggaaatgtagtagaacaaacagttggagcaattagaacagttgcatcattcactggggaa
aagaaagcgataaaaaactatgataataagctgcatattgcgtatgcttccactgttcaa
caagggctggcctcaggcatagggcttggtacagttctgctaattatcttcggtacatac
ggtcttgccatgtggtatggatccaagctggttatagagagaggatatgatggtggacga
gtcatcaattgtataatggccatcatgtctggaggaatgtcgttgggccaaacatcccca
tgcttgaatgcatttgcagcaggacaagctgcagcatataagatgtttgagactatcaaa
cgaaaaccacaaattgatgcctatgacactagtgggactgtgttagaagatattaggggt
gaaattgaactcaaagacgtgtatttcaactacccagcaaggccagacgtccagattttt
tccggtttttcattgcatgttccaagtgggaaaactgctgctttagttgggcaaagtgga
agtgggaagtcaacggttatcagtctattggagagattttatgatccccattctggtgaa
gtactcattgatggtgttgatttaaagcagttgcaactcaagtggataagggagaagatt
gggctagtcagtcaggaacctatcttgtttgctaccactattaaggaaaacatatcatat
gggaaagaagatgctagcgatgaggagatcaggacagcaattgtgcttgctaatgctgca
aaattcattgacaaactgcccaaggggcttgacacaatggtgggtgaacatggaactcag
ctatctgggggacagaagcaaagaattgcaattgcaagagccattttgaagaacccacga
atccttcttcttgatgaagcaacaagtgcactggatgctgagtctgaacgcatcgtccaa
gatgcactagtaaatgtgatggtaaatcgaactactgtagttgttgcacatcgtttgaca
actatcaggaatgcagatatcatagcagtggtttatcaggggaaaatcgttgagcaagga
actcatggggcgctgatcaaggaccctgatggagcttacactcagctagttcacctgcaa
gaaggaaacagtcaagctgaggatcctcatatggaggacactgataaattagataagagt
cctgataatatggacaatagtatcgcccgttctggaagccatagattgtcttcctggaga
tccatgagcagaggttcatcaagcggcaggtcctctgtctcacttagctttagtgttccc
ttcccaattggtattcctgcgactgaaatggctgggcaggatattgaaagacgcgacgga
gaagatgagaagagacgcaaagtgtcattgagacggctggcctacctgaacaagcctgaa
gggccagttttgctacttggatccatagctgcaggaatacatggtgtaatcttcccaatt
tttggactgttactctcaacagccattaagattttctttgaacctcctaatgagctaaag
aaagattccaggttttgggcgcttatgtttgtgggtctgggtgtcctgactctgatggtt
gttccagtacagaactacttctttggtgttgcaggtggtaaattgatacaacgaattcgt
tccttgtcctttgagaaggttgtgcaccaagaaatcagttggtttgatgacccagcaaat
tcaagtggagcagttggtgcaaggctatctaccgatgcttcgagtgttcgcagtctggtg
ggtgatgcattggccctagtagtccagaaccttacaacagtcatagcaggccttgtcata
tcattcacagctaactggatattggccctaataattctagccgtgttgcccttggtcttc
ttgcaaggatattttcagatgaaattcgtgaaagggttcagcgccgatgccaaggtgatg
tatgaagaagcaagtcaagttgcaaatgatgcagttggcagcatcagaactgttgcatca
ttttgtgcggaaaagaaggtgatggatatgtatcaacaaaagtgtgacgcccctatgaag
caaggagttcgactaggacttgttagtggtgctggttttggcttttctttctttgcactc
tactgcacaaatgccttctgcttctatattggagctattcttgtgcaacatgggaaagca
acttttggagaagttttcaaggttttctttgctttgacgatttctgccattggaatttcc
caaactagtgccatggctccagacaccaacaaagctaaagattcaactgctacaatattt
caacttcttgacagcaagcccatgattgattcgagcagcaatgagggcacaacccttgct
aatgtaaagggcgacattgagttccagcatgtcagcttcaaatattcaacaaggccagat
gttcaaattttcagagacttgtccttgagcatcccatctggaaagactgttgccctagtt
ggagagagtggtagtgggaagtcgacagtaatcagcctaatagagaggttctacaaccct
gaatcgggtcgtatactactggatggaatggaaatccagaagttgaagcttagctggctg
aggcaacaaatggggttggtagggcaagagcctgtactcttcaatgaaacgatacgtgcc
aacatagcatatggcaaagagggagccacggaagatgagatcatcgcagccacaaaagca
gcaaatgctcacaacttcatacattcattgccccaaggctacgagacctcagttggggaa
cgaggggtgcagctgtcaggtgggcagaagcagcgaatagccattgcaagggcgatattg
aaggaccccaagatccttctccttgatgaggcaactagtgctctagacgcagagtcagaa
cgtgtggtacaggaagcattagatagagtgatggtggagagaacaactgtagtggtagct
caccgcctgaccaccattaaaggagcagatataattgcagtggtgaagaacggtgtgatc
gctgaaaagggtagccatgaggagctgatgagcatcactgatgggccttatgcatctctt
gtagcacttcatacgacttcctcaacttaa
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integrated database retrieval system
