Vitis riparia (riverbank grape): 117925169
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Entry
117925169 CDS
T07274
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
117925169
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
vri01001
]
117925169
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
vri04131
]
117925169
Enzymes [BR:
vri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117925169
Protein kinases [BR:
vri01001
]
Serine/threonine kinases: Other
VPS15 family
117925169
Membrane trafficking [BR:
vri04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117925169
Autophagy
Autophagosome formation proteins
PI3K complex
117925169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
WD40
HEAT
PK_Tyr_Ser-Thr
NBCH_WD40
HEAT_EZ
APH
TCAD9
Motif
Other DBs
NCBI-GeneID:
117925169
NCBI-ProteinID:
XP_034699968
LinkDB
All DBs
Position
11:complement(17392161..17404140)
Genome browser
AA seq
1545 aa
AA seq
DB search
MGNKIARTTQASASEYYLHDLPSSYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG
DSIDLREYERRLFQIQGIFRALDHPHVWPFQFWIETDKAAYLLRQYFFNNLHDRLSTRPF
LSLIEKKWLAFQLLCAVKQSHENGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRLCYLAPERFYEPGGEMQVAQGAPLRPSMDIFAVGCVVAELFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLDPELRFSAESYLQNYASILFP
SYFSPFLHNFYSCLNPLDSDTRVAVCQSLFHEIHKQMMGNASAEVTSAELSTPLNATGCK
PSKQVVAKQKLNLTKNSSRKQENEKGLIHNQFELLGDINSLLKDVKQSNNYSGAKSVVED
APNSSHQNSGKDSPGRLVETISNVFKKNDYPLLKKITMDDLNTLMSEYDSQSDTFGMPFL
PLPQDCMSCEGMVLIASLLCSCIRNVKLPHLRRGAILLLKSCSLYIDDEDRLQRVLPYVI
AMLSDPVAIVRCAALETLCDILPLVRDFPPSDAKIFPEYILPMLSMLPDDPEESVRICYA
RSISKLALTAYGFLIHSLSLSEAGVLDELNSQQKSLAPSTETSGRLQKTQLAQLRKSIAE
VVQELVMGPKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILPAFLNDRDEQLRAVFYG
QIVYVCFFVGQRSVEEYLLPYIEQALSDATEAVIVNALDCLAVLCKSGFLRKRILLEMIA
HAFPLLCYPSQWVRRSAVTFIAASSENLGAVDSYVFLAPVIRPFLRRQPASLASEKALLS
CLKPPVSRQVFYEVLENARSSDMLERQRKIWYNSSVQPKQWETVDLHRRGAEELNLMKSL
PDGQRALEAQNPVGNAAQQLELTQSNNSEARWRAVGSFMHKDSSTVDISDPLCSDKLQFS
GFMTPQIGGVNSFICDKSSEGIPLYSFSMDKRAAGVPPPASDSSLQLNSLGTGSPSLTWM
DPVSKSFNLANSFPAPKLVSGSFSFSNGSKQFYRVVHEPESRENDQTAYVNSKFQDMGIS
GTSKGSSITVEDSSSSTDITGLPSFARTSSIPDMGWRPRGVLVAHLQEHRSAVNDIAIST
DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYPLEGSRALCTAMLRNSAQVIVGACDG
IIHMFSVDYISRGLGNVVEKYSGIADIKKKDVGEGAILSLLNYCADGSPSQMVMYSTQNC
GIHLWDTRTNSNAWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSW
QYSLVCPIEEICLFVPPPNASVSTMARPLIYVAAGCNEVSLWNAENGSCHQVLRVANNES
DAEMSDLPWALARPSSKSNSKPDIRRNVNPKYRVDELNEPASRLPGIRSLLPLPGGDLLT
GGTDLKIRRWDHYSPDRSYCICGPTIKGVGNDDFFETKSSFGVQVVQETKRRPLATKLTS
KAVLAAAATDSAGCHRDSVLSLASVKLNQRLLISSSRDGAIKVWK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcgaacgacgcaggcgtcggcctccgagtactacctccacgac
ctcccttcctcctacaatttggtgctcaaggaggtgctagggcgaggccgctttttcaaa
tccattcagtgcaagcacgatgagggattggtcctcgtcaaggtctatttcaagcgtggc
gactccatcgatctcagggaatacgagcgtcgcctcttccaaatccaggggatcttccgc
gcccttgaccacccccatgtctggccttttcagttttggattgaaactgataaagcagct
tatcttttgaggcaatacttcttcaataatcttcatgatcggttgagtactcgacctttc
ctcagtctcattgagaagaaatggttggcttttcagttactctgtgcagtgaaacagagt
catgagaatggggtttgtcatggtgatattaagtgtgagaatgtgctggttacgtcatgg
aattggctttaccttgctgactttgcctcatttaaacccacttacatacctgatgatgac
ccatcggatttctcatttttctttgatactggaggaagaaggctttgttatctcgcacct
gagcgattttatgagcctggaggtgagatgcaagtagctcaaggtgcacctttaaggcct
tctatggacatctttgctgtagggtgtgtggttgcagaacttttccttgagggtcagcca
ttgtttgaactatcccagctactggcttatcgcagagggcagtatgatcctagccaacat
ctggagaagatcccagattctggaattcgcaagatgattcttcatatgattcagctggac
ccggagttacgtttttctgctgaaagctatctacagaactatgcatccattttgttccca
agctacttctcaccatttctacacaatttttattcctgcttgaatcctcttgattcagat
acaagggttgcagtctgccagagtcttttccatgagatacacaagcaaatgatgggcaat
gcatcagctgaggtcacaagtgctgagctgagcacacctttaaatgccacaggctgcaaa
ccatcaaaacaggtggttgcaaaacaaaaattgaacttgacaaagaactcctcgagaaaa
caagagaatgagaaaggcttaattcataaccagtttgaactccttggtgatatcaatagc
ctactcaaagatgtaaaacaaagtaataattattctggtgcaaagtcagtagtggaggat
gcacctaattcttcacaccaaaactcgggcaaagattctcctggcaggctagttgaaacc
atctccaatgtattcaagaaaaatgattatccccttctcaagaagattacaatggatgat
ttgaatacattgatgtctgagtatgatagccagtcagatacttttggcatgcctttctta
ccactacctcaggattgtatgagctgtgaaggtatggttcttattgcctcactgctctgt
tcctgtatacgcaacgtcaagttgcctcatttgaggaggggtgcgatacttctacttaaa
tcttgttccctatatattgatgatgaagatcgcttgcagcgtgtgcttccttatgttatt
gcaatgctttctgatccagtagcaattgtgcgctgtgctgccctggagactctttgtgac
attctccctctagttcgagattttcctcctagtgatgctaaaatttttcctgaatacatt
cttcctatgctttccatgcttcctgatgatccagaggaaagtgtgaggatatgttatgct
agaagtatatctaagctggcattaactgcttatggattcttgatccactcattaagcttg
agtgaggcaggggtacttgacgaattgaattcacagcagaaatcattggcaccatccact
gagacttctggaaggctgcagaagacacagcttgcacagttgaggaagtccatagccgag
gttgttcaagaacttgtaatgggcccaaagcaaacgccaaatatcaggagagccctcctg
caggacattggcaacttatgctgcttctttggccagagacaaagtaatgactttctgtta
cccatccttcctgcttttctaaatgacagagatgagcagctaagggcagttttctatggc
cagattgtgtatgtttgcttctttgtgggccaaagaagtgtagaggaataccttttacct
tatattgagcaggctctaagtgatgcaacggaagctgtcattgtcaatgcattggattgc
ttggctgttctgtgcaaaagtggtttcttgcggaagaggatactactggagatgatagcg
catgcctttccattgttatgttatcctagtcaatgggtaagaaggtcagctgtcaccttc
attgctgctagtagtgaaaacttaggtgctgtggattcatatgttttccttgctccagtg
atacgccctttcctccgcaggcaaccagcatctctggcttcagagaaggctcttctttca
tgtcttaagccccctgtctcaagacaggtattttatgaagttttagagaatgccaggagc
tcagatatgttggagagacagagaaagatatggtacaattcatcggtacaacctaaacaa
tgggaaactgttgatttacacaggagaggggcagaggaattaaatttaatgaaaagcttg
cctgatggacaacgagctctcgaggctcaaaaccctgttggcaatgcagcacaacagctg
gagctgactcaatccaacaatagtgaggctaggtggagagcagtgggaagttttatgcac
aaagattctagcactgttgacatctctgatcctctgtgctcagataagctacaattctcc
ggttttatgactccacagattgggggtgtgaacagcttcatttgtgataaatcatctgaa
ggcatacctttatactcctttagcatggacaaacgggcagctggggttcctccgccagca
tccgattcatcattacagttgaactccctaggaactggttcaccatccttgacttggatg
gacccagtaagtaaatcatttaacttggctaattcatttcctgcaccaaagcttgtatca
gggtcattcagcttcagtaatggttctaaacagttctacagagtggtacatgaaccggaa
agcagggaaaatgaccaaacagcctatgtcaacagcaagtttcaagatatgggaatatct
ggaacatcgaaaggaagttctattacggttgaggattcttcctcttcaactgatataaca
ggattgccatcttttgcacggacatcatcgattccagatatggggtggaggccacgcggg
gttttggttgcccacctacaggagcatcgttctgctgtcaatgacattgccatttcaact
gaccacagtttttttgtgagtgcatctgatgactccactgtcaaggtgtgggattcaaga
aaattggaaaaggacatctcatttaggtcaaggctaacttatcctctagagggaagccga
gcactgtgtactgcaatgctccggaactctgctcaagtcattgttggagcatgtgatggc
atcatacatatgttctctgttgattacatttccagaggacttggaaatgttgttgagaaa
tattcaggtattgctgatattaaaaagaaggacgttggggagggggccatcctcagcctt
ttgaactactgtgctgatggctctcctagtcaaatggttatgtacagcacccaaaattgt
ggtatccatttgtgggatactaggacaaattcaaatgcgtggacattgaaagcaattcct
gaggaaggttatgtgtcttctctggtaactggtccatgtgggaattggtttgtatcaggg
tcttcaaggggtgtgcttacactttgggatctgaggttcctggtacctgttaactcctgg
cagtattctcttgtatgccccatagaggaaatatgcctttttgttcctcctccaaatgct
tctgtatctactatggcaagacctctaatttatgttgctgcgggttgcaatgaagtatct
ctttggaatgctgagaacggtagctgccaccaggtactaagggtagcaaataatgaaagt
gacgctgaaatgtctgacctaccttgggccttggccagaccatccagtaagtcaaattct
aaaccagatataagacggaacgtcaatcctaagtacagagttgatgagctgaatgaacct
gcttcccgtcttcctggcatccgatctttgcttccattacctgggggtgatttgttaact
gggggtactgacttgaagatacgtcgatgggaccattacagccccgaccgaagttactgt
atttgtggaccaaccataaagggagttggaaatgatgatttctttgaaacgaaatctagt
tttggggtgcaagtggtgcaggagacaaagagacgtcctcttgcaactaagttgacatca
aaggcagttcttgcagctgcggccactgattctgctggttgtcaccgtgactctgtcctc
tcattggcatctgtcaagttgaatcagagactcttgatatcaagcagtagagatggggct
atcaaggtttggaagtag
DBGET
integrated database retrieval system
