KEGG   Vitis riparia (riverbank grape): 117933046
Entry
117933046         CDS       T07274                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
vri  Vitis riparia (riverbank grape)
Pathway
vri03020  RNA polymerase
vri03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vri00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117933046
  09124 Replication and repair
   03420 Nucleotide excision repair
    117933046
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vri03021]
    117933046
   03400 DNA repair and recombination proteins [BR:vri03400]
    117933046
Transcription machinery [BR:vri03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     117933046
  RNA polymerase III system
   RNA polymerase III
     117933046
  RNA polymerase I system
   RNA polymerase I
     117933046
DNA repair and recombination proteins [BR:vri03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117933046
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 117933046
NCBI-ProteinID: XP_034710289
LinkDB
Position
16:complement(16590369..16594541)
AA seq 142 aa
MADEEYNDVDMGYEDEPPEPEIEEGAEEEAENNNNEDVPDALEEQEKEVHETVERPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggcggacgaagagtacaacgacgtggatatgggatatgaggatgagccgccagagcct
gagattgaagagggtgcagaggaagaagccgaaaataataacaatgaagatgttccagat
gctcttgaagagcaagaaaaagaagtacatgagactgtagaacggcccagaaagacttca
aagtatatgacaaaatatgagagagcaagaatcttgggtacccgtgctctgcagatcagc
atgaatgcgcctgtgatggttgaattggagggtgagacagatccacttgagattgcaatg
aaggaacttcgtgagcggaagatacccttcaccatccgccgctacctgcctgatggaagt
tatgaagattggggggtggatgaattgattgtagaggattcatggaagaggcaagttgga
ggtgattga

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