Vitis riparia (riverbank grape): 117933446
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Entry
117933446 CDS
T07274
Name
(RefSeq) protein EXPORTIN 1A
KO
K14290
exportin-1
Organism
vri
Vitis riparia (riverbank grape)
Pathway
vri03008
Ribosome biogenesis in eukaryotes
vri03013
Nucleocytoplasmic transport
vri03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
vri00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117933446
03008 Ribosome biogenesis in eukaryotes
117933446
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117933446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vri03019
]
117933446
03009 Ribosome biogenesis [BR:
vri03009
]
117933446
03016 Transfer RNA biogenesis [BR:
vri03016
]
117933446
03036 Chromosome and associated proteins [BR:
vri03036
]
117933446
Messenger RNA biogenesis [BR:
vri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
117933446
Ribosome biogenesis [BR:
vri03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
117933446
Pre-60S particles
117933446
Transfer RNA biogenesis [BR:
vri03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
117933446
Chromosome and associated proteins [BR:
vri03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
117933446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Adaptin_N
DUF3385
Motif
Other DBs
NCBI-GeneID:
117933446
NCBI-ProteinID:
XP_034710693
LinkDB
All DBs
Position
16:3137199..3155841
Genome browser
AA seq
1076 aa
AA seq
DB search
MAAEKLRDLSQPIDVALLDATVAAFYGTGSKEERTAADQILRELQNNPDMWLQVVHILQS
TQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRRERLYVNK
LNIILVQVLKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQ
KIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLET
LLKFFPVPSYRNLTLQCLTEVAALNFGDFYNLQYVKMYNIFMVQLQSILPTTTNIPEAYA
HGSSEEQAFIQNLALFFTSFYKSHIRVLESSQENISALLLGLEYLIGISYVDDTEVFKVC
LDYWNSLVLELFEAHHNLDNPAVAANMMGLQIPLIPGMVDGLGSQLLQRRQLYSGPMSKL
RLLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQM
LKKLSKQLKGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDN
KAVIASNIMYVVGQYPKFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCK
RKFVIIQVGENEPFVSELLSGLPSTIADLEPHQIHTFYESVGHMIQAESDPQKRDEYLQR
LMELPNQKWAEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVATSLGTYFLSQITLIFLD
MLNVYRMYSELISNSIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQF
VPPMMDPVLGDYARNVPDARESEVLSLFATIINKYKGAMIEDVPRIFEASFQCTLEMITK
NFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNL
LLEMLKNFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGA
LTEPLWDVSTVAYPYPNNTMFVREYTIKLLSTSFPNMTTSEVTQFVTGLFESRNDLSTFK
NHIRDFLVQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPNEIQDEMLDS
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagaagcttagggatttgagccagccgattgatgtggcgctgctcgacgct
accgtcgcggccttctacggcactggatctaaggaggagaggacagctgcagaccagatt
ttgagggagctgcaaaacaatccagatatgtggcttcaagtagttcatattctacaaagc
actcagaatctaaacaccaagttctttgccttgcaggtccttgagggtgttattaagtat
aggtggaacgcattgcctgttgaacaacgggatgggatgaagaattacatttctgaagtc
attgtccagctttcaagcaatgaggcctcatttcggcgagagaggctgtatgtcaacaag
ctcaatatcatcttggttcaggttttgaagcatgagtggccagcaagatggcgaagcttc
attcctgatcttgtttcggcagcaaaaactagtgaaacgatttgtgaaaattgcatggct
attttgaaacttctaagtgaggaggtttttgatttctcaaggggagaaatgactcaacag
aagatcaaagagcttaaacaatctctaaacagcgagtttcagctcattcatgagttatgc
ttatatgtactatcagcatctcaaagaactgaacttatacgggcaacgctggctacattg
catgcttttctctcatggattcctttgggctatatttttgaatcaccgctgctggaaacg
ctcctaaaattttttcctgtcccatcatatcggaatctcaccctccagtgtttgacagag
gttgcagcccttaattttggggacttctataaccttcagtatgtgaaaatgtataacata
ttcatggtccagttacagtctattcttccaactactacaaacatacctgaggcttatgca
catggctctagtgaggagcaggcatttattcagaaccttgctctatttttcacctcattt
tataagtctcatattcgagtgctggaatctagtcaagagaacatatctgcactcctactg
ggtcttgagtatctcattggcatctcatatgtggatgacactgaagttttcaaggtttgt
ctggactattggaactccttagttttggagctgtttgaggcacaccataatttagataat
cctgcagtggctgcaaatatgatgggactgcagataccattgatccctggtatggttgat
ggccttggttctcaacttctgcagcggcggcagctttattctggtcctatgtcaaagttg
agattgcttatgatctgtcgtatggctaagcctgaagaagttctgattgttgaagatgaa
aatgggaatattgttcgtgaaactatgaaagacaatgatgtccttgttcagtataagatt
atgagagaaactctgatctatttgtcacaccttgatcatgaggatactgaaaagcagatg
ctgaaaaaattaagtaagcagctgaaaggtgaggattggacatggaataacttaaataca
ttatgctgggcaataggatccatatccggttccatgatggaagaacaggaaaacagattt
ctggtgatggtcatccgtgatttactgaatttatgtgaaatcacaaaaggaaaagataac
aaggccgtcattgcaagcaacatcatgtatgttgttggacaatacccaaaatttctgagg
gcccattggaagttcttgaaaactgttgtgaataagttatttgagttcatgcatgagaca
catcctggagttcaggacatggcctgcgatacattcttgaaaattgtccagaagtgcaaa
cgtaaattcgttattatacaggttggtgaaaatgaaccatttgtatccgaattactatca
ggccttccatcaactattgcagatcttgagcctcaccaaatccatactttttatgaatct
gttggtcatatgatccaagcagaatctgatccccagaagagggatgagtatctgcagagg
ttgatggaactcccaaatcagaaatgggctgaaattattggacaggcacgccaaagtgtt
gatttcctgaaggatcaagatgtgatccggactgtgcttaatatattgcagacaaataca
agtgttgccacttcacttggaacatatttcttatcacaaattacgctgatatttttggac
atgcttaacgtgtacagaatgtacagtgagcttatatcgaatagcattgctgaaggaggg
ccctttgcctctaaaacgtcctatgtaaagcttttgcggtcagttaagagggagactctc
aagctcattgagacatttttggacaaggctgaagatcagccacaaattggaaagcaattt
gttcctccaatgatggatcctgttcttggtgactacgcaaggaatgtacctgatgctagg
gaatcagaagttttgtcactttttgcaacaataataaacaagtacaagggtgcaatgata
gaggatgtgcctcgcatatttgaagccagttttcaatgcacgctggagatgattactaaa
aattttgaagattatccagagcatcgcctaaaattcttctccttacttcgtgcaattgct
acacattgctttcctgctttgattcggttatcaagccagcaattgaagcttgtaatggac
tcaatcatatgggctttccggcacactgagaggaatattgcagaaacaggtttaaacctt
ttattggagatgttgaagaactttcaggcttctgagttctgtaaccagttctaccgaacg
tacttcttgacaatcgagcaagaaatttttgctgttctgacagatacctttcacaaacct
ggattcaagttgcatgtcttagtactgcagcacctattttgcctggttgagtctggtgca
ttaacagagcctttatgggatgtatctacagttgcttatccatatcctaataacacaatg
tttgttcgtgagtataccataaaactcttgagtacctcgttccccaacatgacgacatct
gaggtgacccaatttgtgactggactatttgagtcgagaaatgacctctcaacatttaaa
aatcacatacgagacttcctcgttcaatcaaaagaattctctgctcaggataacaaagat
ctctatgcagaagaagctgctgctcagagagaaagagagcgacagcggatgcttagtatc
ccagggctcatcgccccaaatgagattcaagatgagatgttggactcatag
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integrated database retrieval system
