Vibrio rotiferianus: BSZ04_20055
Help
Entry
BSZ04_20055 CDS
T05115
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vro
Vibrio rotiferianus
Pathway
vro00730
Thiamine metabolism
vro01100
Metabolic pathways
vro01240
Biosynthesis of cofactors
vro04122
Sulfur relay system
Module
vro_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vro00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BSZ04_20055
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BSZ04_20055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vro03016
]
BSZ04_20055
Enzymes [BR:
vro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BSZ04_20055
Transfer RNA biogenesis [BR:
vro03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BSZ04_20055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
ASI97187
UniProt:
A0A2K7SWA6
LinkDB
All DBs
Position
2:complement(2412711..2414159)
Genome browser
AA seq
482 aa
AA seq
DB search
MKFIVKPHPEIFVKSESVRKRFTKILECNIRNIVKSRTESVAVFNRRDHIEVTSESDEFH
AEVLEILTHTPGIHHTLEVKQTEFKDLHDIYEQVLELSGASIENKTFVVRAKRRGKHDFT
SIELERYVGGGLNQAVESASVKLHKPDVTIKIEVSNDKLNQVLARHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKVHYCFFNLGGPAHEIGVKQVSHYLWNKYGSSAKVRFI
SVDFEPVVAEILEKVDDGQMGVILKRMFMRAAGMVAQRMKIEALVTGEALGQVSSQTLTN
LRHIDNVTDTLILRPLINWDKEDIINLAREIGTEDFAKTMPEYCGVISKKPTVKAVKGKL
EAEEEKFDFSILEKVVQEARMMDIRDIAKESEQAAPEVEQVQAVEEHAIVLDIRSPEEED
DNPLEIDGVDVKHIPFYKLGTQFGDLDQTKTYLLYCDRGVMSRLQALYLQEQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttattgtaaagccccatccagaaatttttgtaaaaagtgaatctgtgcgcaag
cgcttcacaaagattttagagtgcaacattcgtaacatcgttaagagccgtacggaatca
gtcgcggtatttaaccgtcgtgatcacattgaagtgacctctgaaagtgatgagtttcac
gctgaagtactggaaatcctgacacatacgccaggtattcaccatactcttgaagtgaaa
caaacagaatttaaagatctgcacgatatttacgagcaagttcttgaactaagcggtgca
tcgatcgaaaacaagaccttcgtggtacgtgcgaagcgtcgtggtaagcacgactttact
tctatcgaactagaacgttatgtcggtggtggtctgaaccaagcggttgagagcgcgagc
gtgaagctgcataagcctgacgtaaccattaagattgaagtttcaaacgataagctaaat
caagtactggcacgccataaaggtctaggtggtttcccactaggcacgcaagaagacgta
ttaagcctgatctctggtggcttcgattctggtgtttctagctacttgcacattaaacgt
ggttcaaaagtacattactgcttctttaacctaggcggtccagcacatgaaatcggcgtt
aagcaggtttcacactacctatggaacaaatacgggtcttcggcgaaagtacgtttcatc
tcagttgatttcgagcctgtagttgctgaaatccttgagaaagttgacgatggccaaatg
ggcgtgatcctgaagcgtatgtttatgcgtgcagcgggtatggtcgctcaaagaatgaag
atcgaagcattggtaaccggtgaagcgctaggtcaggtatctagccaaacactgacgaac
ctacgccacatcgataacgtaacagatacattgattcttcgtccgcttatcaactgggat
aaagaagacattatcaacctagcgcgtgaaatcggcacagaagatttcgcgaagacgatg
ccagaatactgtggtgttatctctaagaagccgacagtgaaagcggtgaaaggcaagcta
gaagctgaagaagagaaatttgatttcagcattcttgagaaagtggttcaagaagctcgc
atgatggacattcgtgacatcgcgaaagagtcagaacaagcagctccagaagttgagcaa
gtacaagccgtagaagagcacgcaatcgtactggatattcgtagccctgaagaggaagac
gacaacccactagaaatcgatggcgttgatgttaagcacatcccattctacaagttaggt
acgcagtttggtgatttagaccagactaagacatacctactgtactgtgaccgtggtgtg
atgagccgcctgcaagcactttacttgcaagagcaaggcttcaacaatgtgaaggtttac
cgaccataa
DBGET
integrated database retrieval system
