Vibrio ruber: RND59_16975
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Entry
RND59_16975 CDS
T09542
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
vru
Vibrio ruber
Pathway
vru00052
Galactose metabolism
vru00511
Other glycan degradation
vru00600
Sphingolipid metabolism
vru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RND59_16975
09103 Lipid metabolism
00600 Sphingolipid metabolism
RND59_16975
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RND59_16975
Enzymes [BR:
vru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RND59_16975
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_72
Motif
Other DBs
NCBI-ProteinID:
WNJ97819
LinkDB
All DBs
Position
2:complement(264484..267561)
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AA seq
1025 aa
AA seq
DB search
MRTFQDIIASRDWQNPGAVRMHTLSAHVPLHSYRQIEDARQSLASSRHYLNGQWAFKFYS
APEMVDVSVIEPESDLSAWEQIEVPGNWQLQGFDHPIYTNVKYPFPDCAPTVPAQNPTGC
YARDFVVEPATGEQTRILFEGVNSAFHLWCNGQWVGYAQDSRLPAEFDLTGHIHPGHNRL
VVMVIRWSDGSYLEDQDMWWLSGIFRDVYIYHKPALAINDVFIRPELDALYQDGALRVTT
KLSQQTANHRVEVMLFDAAGQPVVMQGETCCTTNQHAVDEKGGWADQVEHHLTISRPRHW
NEQTPYLYRCVVALLDEQSQVIECEAFSVGFRTVAIEDGLLKVNGKALLIRGVNRHEHHP
ETGHYVDEATMVKDILLMKQHNFNAVRTSHYPNHPRWYELCDQYGLYVVDEANIETHGQF
PMCRLSEDPQWNHAYMQRMIGLVERDKNHPSVIIWSLGNESGIGLNHHAMYQWTKQRDPS
RPIQYEGGGADTAATDIICPMYARVDQHQGGTNPKYAIKDWIGRPGEQRPLILCEYAHAM
GNSLGSFDKYWQAFRQYPRLQGGFIWDWVDQGLSKWDEHGRHYWAYGGDFGDEINDRQFC
INGLIWPDRTVHPTLLEAKRAQQFYRIEFDGQHQLTLFSEHQFAEEALICCWTVLEDGVA
ISAGELTVVMAPEAEHCIELPLEPRLYQPEKIYHLNIDLLLAGQTLWAPARHSVAQAQFE
LKAASPRLPMDKVTPLTDIRVSESDEQVIVTVAEQQWTFHRGSGYLTHWEQQGEQLLAAP
LKDNFYRAPLDNDIGTSEVDRPDPNSWMARWKQAGLDRLAGRCVSMTVESGQHCVMIKTQ
FDYTSPTGQVLRTQWCYTVNQQGEMRVDVDVYPCTTLPSLPRVGFSCALPLTERVTWFGR
GPHENYPDRCLSARFGHYDATVSEMHTPYIFPTDNGLRCDTRKLVLGGITVQGTFHFSVS
RYSQAMLETAKHTHELSADDVIYLNVDGFHMGIGGDDSWTPSVHPEFLLDAAHYHYHVVL
SSMRP
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttttcaagatattattgccagtcgagactggcagaatccgggcgctgtccgg
atgcatactctgtcagctcacgttccgctacacagctatcgtcaaattgaagatgcccgt
cagagtcttgcgagtagtcgtcattatctgaacggacaatgggcattcaaattctattct
gctccggaaatggtggatgtatcggtcattgagccggaaagtgacttatcggcatgggaa
cagattgaggttcccggtaactggcagttgcaagggtttgatcatccgatctataccaat
gtgaagtatccgtttcctgactgcgcacctacggtacccgcacagaatccgaccgggtgt
tatgctcgtgattttgttgtggaaccagccaccggagaacagactcgcatcctgtttgaa
ggggtaaattcagcgtttcatttgtggtgtaatggtcaatgggttggttatgcgcaggac
agccgactaccggcagaatttgacttaacgggtcatatccatcccggtcataaccgcctt
gtcgtcatggtgatacgctggtctgacggttcttatctggaagatcaggatatgtggtgg
ctgagtggtattttccgcgatgtatacatctatcacaagcctgctctcgcaatcaacgac
gtttttatccgtccggaactggatgcactctatcaggacggggcactgcgcgtaacgacg
aaactcagtcagcagacagccaaccaccgggttgaggtgatgctgtttgatgccgcaggc
cagccggtcgtcatgcagggagagacgtgttgcaccaccaatcagcatgcggttgatgag
aaaggcggctgggcggatcaggtcgaacaccatctgaccatctctcgtccccgtcactgg
aatgagcaaaccccttatttgtaccgttgtgtcgtcgcgctgttggatgagcagtcacag
gtgattgagtgtgaagccttctcggtcggattccgcaccgttgccattgaagatgggttg
ctcaaagtcaatggtaaagccctgttgatccgcggtgtgaatcgtcatgaacaccatccg
gaaaccggtcactatgtcgatgaagcgacgatggtcaaagatattctgttgatgaagcag
cacaactttaatgcggtgcgcacctcgcattacccgaatcatccgcgctggtatgaactc
tgtgatcaatatggtttgtatgtggtcgatgaagccaatatcgagacgcacggccagttt
ccgatgtgccgtttatctgaggatccgcaatggaatcatgcttacatgcagcgcatgatt
ggcttggtggaacgggataaaaatcatccgtcagtgattatctggtcgttggggaatgaa
tccggtatcggtctgaaccatcatgccatgtatcagtggactaagcagcgcgatccgtca
cgcccgattcagtatgaagggggcggtgccgatacggctgctacggatattatctgtccg
atgtatgcccgggttgaccagcatcaggggggtacgaatccaaaatatgcaattaaagac
tggattggccggcccggtgaacagcgtccgctaattctgtgtgaatatgcccatgcaatg
gggaatagcctcggaagttttgataaatattggcaggcgtttcgccagtacccacgcctg
caaggcggatttatctgggactgggttgatcaggggctttcaaagtgggatgagcacggc
cggcattactgggcatatggcggggatttcggcgatgaaattaatgatcgtcagttttgt
atcaatggcttaatctggccggatcgtacggttcatccgacattattggaagcgaagcgg
gctcagcagttctaccggattgaatttgatggtcaacatcagttgacgctgttcagtgaa
catcagtttgccgaagaagcactgatttgttgctggacggtgctggaagacggcgtcgca
atttcggcaggggagctcacggttgtgatggcacctgaagcggagcactgcatcgaatta
cctcttgagccgcgtctttatcagccggagaaaatttatcatctgaatattgatttactg
ttagcgggacagacgctttgggcgccggctcgtcattcggtggcgcaggcgcagtttgaa
ctgaaggctgcatctccccgcttacccatggacaaggtaacaccattgaccgacattcgt
gtctctgaatcagatgagcaggtgatcgtcacggtcgcagagcaacagtggacgttccac
cgaggcagcggttatctcacgcattgggagcaacagggagagcagttattagcggcaccg
ttgaaagataacttctatcgtgcaccgctcgataatgatatcgggaccagtgaagtggat
cgacctgacccgaatagctggatggcgcgctggaagcaggccgggcttgatcgtctggca
ggacggtgcgtcagtatgacggttgagtcagggcagcattgtgtgatgattaaaacgcaa
tttgattatacctcaccgaccggacaggtattgcggacgcaatggtgttatacggtgaat
cagcagggcgaaatgcgggttgatgtcgatgtgtatccatgtacgacattaccgtctctg
ccacgagtcggattttcttgtgcactgccgttaaccgagcgtgtgacatggtttggccgc
gggccgcacgaaaactacccggatcgttgtctgtccgcacgcttcggacattatgatgcg
acagtgagcgagatgcatacgccttatattttcccgacggataacggattgcgttgtgat
acccgaaaactagtgttgggaggaattacggtgcaggggacgttccatttcagtgtcagc
cgctactcacaggcaatgcttgaaaccgccaagcatacccatgagctgagcgctgatgat
gtgatttacctgaatgtggatggctttcatatggggatcggtggtgatgattcctggaca
ccgagtgttcatccggaattcctgttagatgcagcgcactatcattatcatgttgtgctg
tcatcaatgcgtccataa
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integrated database retrieval system