KEGG   Aliivibrio salmonicida: VSAL_I0922
Entry
VSAL_I0922        CDS       T00782                                 
Symbol
ribD
Name
(GenBank) pyrimidine deaminase/pyrimidine reductase (riboflavin biosynthesis protein RibD)
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vsa  Aliivibrio salmonicida
Pathway
vsa00740  Riboflavin metabolism
vsa01100  Metabolic pathways
vsa01110  Biosynthesis of secondary metabolites
vsa01240  Biosynthesis of cofactors
vsa02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vsa00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VSAL_I0922 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VSAL_I0922 (ribD)
Enzymes [BR:vsa01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VSAL_I0922 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VSAL_I0922 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam DUF3612
Other DBs
NCBI-ProteinID: CAQ78607
UniProt: B6EI96
LinkDB
Position
1:1020632..1021753
AA seq 373 aa
MKFTPQDHLMMQRAIQLAKRGIYTTAPNPNVGCVLVKNGLIVGEGAHLKAGEPHAEVHAL
RQASENAKGATAYVTLEPCSHYGRTPPCAEGLIKAGVVKVICAMVDPNPQVAGRGLAMLE
AAGIETASGLLETESRALNPSFLTRMETGKPFVQLKMAASLDGKTALKNGVSQWITSKEA
RQDVQRYRAQAGVILSTAKTVIEDNASLNVRWSDLPNSIQESYLEAEVRQPLRVILDRQH
QLTSELALFNTTGNVVTVSHQPSHPLSHPESHLYCDLDNNKQLVLSDVIQKIAQEHNVNH
LWVEAGATLAASMICEGLVDELIIYLAPKLMGADGRSIVNLIGLEAMSEAINLDISDIRM
VGKDIRITATIVR
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgaaatttactcctcaagatcacttgatgatgcagcgcgctattcaattagctaaacgt
ggtatttatacgacggcaccgaatccaaatgtgggctgcgtactcgttaaaaatggtctt
attgttggtgaaggggcacaccttaaagcgggtgagcctcatgctgaagttcatgcttta
cgccaagcaagtgagaatgcgaagggggcaacggcttacgttactttagaaccgtgttct
cattatggtcgaaccccaccttgtgctgaggggctaataaaagcaggcgtagtaaaagtt
atttgtgccatggttgatccaaacccacaagtagcgggtcgaggtttagcgatgctagaa
gccgcaggaatagagacagcgtcgggcttattagaaacggagtctcgtgcactgaatcct
tcatttttaactcgaatggaaacgggtaaaccgtttgttcaattaaaaatggcggccagc
ttagatggtaaaacagcgctgaaaaatggtgtaagtcaatggatcacatcaaaagaagca
cgacaagatgtacagcgttatcgtgcacaagccggagtgattctatcgacggcaaaaacg
gtcattgaggataatgcctcccttaatgttcgttggagtgatttacctaattcaattcaa
gaatcgtatttagaagcagaggtaaggcagccattacgtgtcattttagatcgtcaacat
caacttacttctgaacttgctctgtttaacactactgggaacgtggttaccgtttctcac
caaccttcacatcctcttagccatccagaaagccacttgtattgtgatcttgataataat
aaacaattagtattgtctgatgtaatacaaaaaatagcccaagaacataatgtaaaccat
ctttgggttgaagctggtgcaacacttgctgcaagtatgatttgcgaaggtctggtcgat
gaacttattatctatttagcgccaaagttaatgggtgcagatggccgaagtatagtgaac
ctcatcggattagaagcgatgtctgaagcaattaatttagacattagtgatattcgaatg
gtcggcaaagatattcgaattacagcaacaatagtaaggtaa

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