Vibrio scophthalmi: VSVS12_00062
Help
Entry
VSVS12_00062 CDS
T04650
Symbol
ubiD
Name
(GenBank) 4-hydroxy-3-polyprenylbenzoate decarboxylase
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
vsc
Vibrio scophthalmi
Pathway
vsc00130
Ubiquinone and other terpenoid-quinone biosynthesis
vsc01100
Metabolic pathways
vsc01110
Biosynthesis of secondary metabolites
vsc01240
Biosynthesis of cofactors
Module
vsc_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
vsc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
VSVS12_00062 (ubiD)
Enzymes [BR:
vsc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
VSVS12_00062 (ubiD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ANS83903
LinkDB
All DBs
Position
1:complement(57747..59591)
Genome browser
AA seq
614 aa
AA seq
DB search
MSFKDLREFVDQLEKLGKLKRITHPIDPRYEMTEISDRVLRAGGPALLFENPIGYDYPVL
TNLFGTPERVAIGMGRSEVKELREVGKLLAYLKEPEPPRGFKDALDKLPVFKQVLNMPAK
RLRKAPCQEIVWQGEEIDLDKIPVMSCWQDDVAPLLTWGLTITKGPNKKRQNLGIYRQQK
IGKNKIIMRWLAHRGGALDLRDWMETNPGERFSVSVAFGADPATILGAVTPVPDSLSEYA
FAGLLRGSRTEVVKSLSNDLDVPASAEMVFEGYIDPQEFADEGPYGDHTGYYNEKEKHHV
FTITHITMRQRPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIEDFYLPPEGCSY
RMAIVTLKKQYPGHAKRVMMGVWSFLRQFMYTKFVIVCDESVNARNWDEVVQAMTSNMDP
VRDTLLIEHTPIDSLDFASPVVGLGSKIGWDATIKWQAELASSVAESKGELFDPDAILEQ
IKLANPIIRDIYLPQGALCGQMVLVSIDKQNPGEGQQVIAAIWSHLSSLVDPKFIVVCDD
DVNIRDWNDVIWAVTTRMDPARDSRLDRDADVGRIALDATNKLGDEASREWGIPIKKDPL
LVDKIDAIWHQLGL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaaggacttgcgcgaatttgttgaccagcttgagaagcttggaaaattaaaa
cgcattactcacccgattgatccccgttatgaaatgacagaaatcagtgaccgcgtacta
cgtgccggcgggcctgctttgttgtttgaaaatccgattggttacgattatccggtactc
accaacttatttggcacaccagaacgcgttgcgattgggatgggacggtctgaggtgaaa
gagctacgtgaagttggcaaattactggcgtacttgaaagagccagagccaccgcgtggt
tttaaagatgcgcttgataagctgccggtctttaaacaagtccttaatatgccggctaaa
cgcttacgtaaagcaccttgtcaggagattgtttggcaaggtgaagagattgatcttgat
aaaattccggtgatgagttgctggcaagacgatgttgctcctttgcttacgtggggttta
acgatcaccaaagggccgaataaaaagcgtcagaatctcggtatttatcgccagcaaaaa
attggtaaaaacaagatcatcatgcgttggcttgctcatcgtggtggtgcgttagatctg
cgtgattggatggaaacaaatcccggagagcgattctctgtctcggtggcatttggtgcc
gatccagcaactattcttggcgcggtgacgcctgttccagatagtttatcggaatacgca
tttgcggggctgttgcgtggcagccgtactgaagttgtaaaatcactgagcaacgacctt
gatgtaccagccagtgctgaaatggtgtttgaaggttatatcgatccacaagagtttgct
gatgaaggtccgtatggtgatcacaccggctactacaacgaaaaagaaaaacatcacgtc
tttacaattacgcatatcactatgcgtcagcgacctatttaccacagtacttacactggt
cgcccgccggatgagccagcggtattgggggtagcattaaatgaagtctttgttccgatt
ttgcaaaagcaatttcccgagatagaagatttctatttacccccagagggctgctcatat
cgtatggcgattgtgacgctaaagaaacaataccctgggcatgctaagcgcgtgatgatg
ggagtgtggtctttcttacgtcaattcatgtataccaaatttgtcattgtgtgtgatgag
tcagttaatgcgcgcaattgggatgaagtcgtgcaagcaatgaccagcaacatggatcct
gtgcgtgacacgttgttgattgagcatacgccgattgactcgttggactttgcttcacca
gttgttgggcttgggtcaaaaattggttgggatgcgacgataaagtggcaagccgaactt
gcctcaagtgttgctgagtcaaaaggtgagttattcgatccagatgcgattcttgaacag
ataaaattggcgaacccaatcattcgtgacatctatctgcctcaaggcgcactatgtggg
caaatggtattggtttcgattgataagcaaaatccgggtgaaggacaacaggtgatagct
gcgatatggtcgcatttatcttcgctggtcgatccgaagtttatcgtagtatgcgatgat
gatgtgaacattcgcgattggaatgatgtcatatgggctgtgaccactcggatggatcct
gcacgtgatagtaggcttgatcgtgatgctgatgttgggcgcattgctttggatgcaacc
aataaactcggtgatgaagcttctcgtgagtgggggatacccattaagaaagatccactg
ttggtcgacaaaatcgatgcaatatggcatcaattaggactgtaa
DBGET
integrated database retrieval system
