KEGG   Vibrio scophthalmi: VSVS12_00853
Entry
VSVS12_00853      CDS       T04650                                 
Symbol
ribD
Name
(GenBank) Diaminohydroxyphosphoribosylaminopyrimidine deaminase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vsc  Vibrio scophthalmi
Pathway
vsc00740  Riboflavin metabolism
vsc01100  Metabolic pathways
vsc01110  Biosynthesis of secondary metabolites
vsc01240  Biosynthesis of cofactors
vsc02024  Quorum sensing
Module
vsc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vsc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    VSVS12_00853 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    VSVS12_00853 (ribD)
Enzymes [BR:vsc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     VSVS12_00853 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     VSVS12_00853 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD T2SSM_b
Other DBs
NCBI-ProteinID: ANS84641
UniProt: A0A1B1NLV0
LinkDB
Position
1:912589..913695
AA seq 368 aa
MATFTPQDYLMMSRAIKLAQGGIYTTAPNPNVGCVITRDDQIVGEGFHYRAGEPHAEVHA
LRMAGKLAEGATAYVTLEPCSHYGRTPPCAEGLIKAKVAKVICAMQDPNPQVSGRGINML
REAGIEVQVGLLEADAQALNLAFIKRMQTGMPFVQLKMAASLDGQTALANGQSQWITSAQ
ARQDVQAFRAQSGAILSTSQTVIEDNASLNVRWDDLPLSIQAHYPAEELRQPVRVILDRQ
NQLSADLKLFQTAGERLIVAPGGDVECLLNDDQQIDLRATFEMLAKQHNINHIWVEAGAT
LARSLMQLQLVDEVVLYQAPKLMGSDGRGLFGALGFQEMSQVIELDITELKQVGRDIRIL
AKPIYKEQ
NT seq 1107 nt   +upstreamnt  +downstreamnt
atggcgacatttactccgcaagattaccttatgatgtcacgagcgattaaattggcgcaa
ggtggcatctataccactgcgcccaatccgaatgtcggttgtgtgatcactcgtgatgat
caaatcgttggtgaaggctttcactatcgtgctggcgaaccccatgccgaagtacatgct
ttgcgcatggctggtaaattggctgaaggtgcaaccgcttatgtgacattagagccttgt
tctcattatggacgaacgcctccgtgcgctgaaggtttgattaaagccaaagtcgctaaa
gtgatctgcgcgatgcaagatccgaatccgcaagtgtcaggtcgtggcattaacatgctg
cgcgaagcgggaattgaggtgcaagtcggtttacttgaagctgatgctcaagcgcttaac
ctggcctttattaaacgcatgcaaacaggtatgccgtttgttcaattaaaaatggccgcc
agcctcgatggccaaaccgcattggctaatggtcagagccaatggattacatcggcgcaa
gcgagacaagatgtacaagcctttcgagctcaatctggtgcaattctttcaaccagccaa
accgtgattgaagataacgcttcgctcaatgttcgttgggatgatcttcccctatcgatt
caagcccattacccagcagaagagttgcgccaaccagtacgtgtaattcttgaccgtcaa
aatcaattgtcagcggatttgaagttatttcaaaccgcaggagaacgattaattgtggct
ccgggtggcgatgttgagtgcttgctgaatgacgatcagcaaatagatttacgcgcaaca
tttgaaatgttagctaaacagcacaatattaatcatatctgggttgaagcgggggcgacg
cttgctcgttcactgatgcagctgcagctggtggacgaagtcgtactttaccaggctcct
aaactcatgggcagcgatggtcgcggtttattcggcgcattgggtttccaagaaatgtcg
caagtgatcgaacttgatattaccgagctgaagcaagtaggacgcgatattcgcatcctt
gctaagccaatctataaagaacagtaa

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