Vibrio mediterranei: BSZ05_07320
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Entry
BSZ05_07320 CDS
T04936
Name
(GenBank) lysine decarboxylase LdcC
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00310
Lysine degradation
vsh01100
Metabolic pathways
vsh01110
Biosynthesis of secondary metabolites
vsh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
BSZ05_07320
Enzymes [BR:
vsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
BSZ05_07320
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Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ASI89605
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Position
1:1576039..1578177
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AA seq
712 aa
AA seq
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MNIFAILNHMGVFFKEEPVRQLHAALEKAGYDVVYPVDDKDLIKLIEMNPRVCGVLFDWD
KYSLNLCERISAVNEKLPVHAFANDQSTLDISLTDLRLNVSFFEYALGMADDIVIKVNQA
TEAYKNAIMPPFTKALFKYVEEGKYTFCTPGHMGGTAFQKSPAGSIFYDFYGPNTFKADV
SISMPELGSLLDHSGPHKEAEEYIARTFNADSSYIVTNGTSTSNKIVGMYSAPAGSTVLV
DRNCHKSLTHLMMMSDVTPIYFRPTRNAYGILGGIPQREFSREVIANKVANTEGASAPTY
AVVTNSTYDGLLYNTQFIKESLDCKHIHFDSAWVPYTNFNAIYNGKCGMSGEAMPGKVFY
ETQSTHKLLAAFSQASMIHIKGEFDKASFNEAFMMHTSTSPQYGIVASTETAAAMMRGNT
GRKLMQDSIDRAIRFRKEIKRLRGESEGWFFDVWQPDNIDTTECWKLDPKETWHGFKDLD
DDHMYLDPIKITLLTPGMSKSGEMESTGIPASLVAKYLDERGIVVEKTGPYNLLFLFSIG
IDKSKAMQLLRGLTEFKRGFDLNLTVRTMLPSLYQEDPHFYEGKRIQEVAQGIHELTMKY
QLPELMYKAFDVLPEMKVTPHAAWQQELRGQIEEINLKEMVGRVSANMILPYPPGVPLVL
PGEMVTDSSRPVLDFLEMLCEIGAHYPGFETDIHGVYRQKDGSYTVKVLKDR
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttttgcaatccttaatcacatgggtgtgttcttcaaagaagagccagttcgt
caactgcacgctgcgctagaaaaagcaggctatgacgtagtttatccagttgacgacaaa
gacctaattaaactgattgaaatgaatccccgcgtctgtggtgtgctgtttgactgggat
aaatactcgctcaatctttgtgagcgcatcagcgcagtaaatgagaagctgccagtacat
gcatttgctaatgaccaatctacattggatatttcacttacggatctgcgtttaaatgtc
agcttctttgagtacgctttaggtatggcggacgatattgtcatcaaagtgaaccaagca
acggaagcgtataaaaacgctatcatgccgccattcactaaagcgttatttaaatatgtc
gaagaaggaaaatacactttctgtactccaggacatatgggaggcacggcatttcaaaaa
agccctgcgggaagtattttctatgatttctatggcccaaataccttcaaggccgatgtc
tctatctctatgcctgaactaggatcgttacttgatcattctggtccgcacaaagaagcg
gaagagtatattgcgagaacatttaacgcggatagttcttacattgtgactaatggtaca
tcgacatcgaacaaaatcgttggtatgtactcagcgccagcgggcagtactgtgcttgtg
gatcgtaactgtcataagtcactaactcatttaatgatgatgagcgacgtgacaccgatt
tacttccgtccaactcgcaatgcttacggtattcttggggggattccacaacgcgagttt
agccgtgaggttattgctaacaaagtagcaaatactgaaggggctagcgcaccgacctat
gcggtagtcactaactcaacgtatgatggtctgctttacaatacccagttcatcaaagag
tctttggattgtaagcacattcattttgacagtgcttgggtgccttacactaatttcaac
gctatttataatggcaagtgtggcatgagcggtgaagcaatgccgggtaaagtgttctat
gagacacaatcgactcacaaattgttggcagccttctctcaagcttccatgattcacatt
aaaggtgagtttgataaagcttctttcaatgaggcatttatgatgcacacctcaacctca
ccacaatacggtattgtggcatcaacagaaacggcagcggcaatgatgcgtggtaatact
ggccgtaaattgatgcaagactctatcgaccgagcgattcgtttccgtaaagagatcaaa
cgccttagaggtgaaagtgaaggctggttcttcgatgtatggcagcctgacaacatcgac
acaacagaatgctggaaattggatcctaaagagacatggcatggatttaaagatctagac
gatgaccacatgtacttagatccaatcaaaatcacgctattgactccgggtatgagtaag
tctggtgagatggaatcaaccggtattccggcttccctagttgctaaataccttgacgaa
cgcggtatcgtggtggagaaaacaggcccatacaatttgttgttcttgttctccattggt
atcgataaatctaaagcaatgcaactgctgcgcggtttaaccgagtttaaacgtggtttc
gaccttaacctaaccgtacgtactatgttgccgtcactataccaagaagaccctcacttc
tatgaaggcaaacgcattcaagaggtggctcagggtattcatgagctaacaatgaaatac
caattaccagaattgatgtacaaagcattcgatgttctgcctgaaatgaaagtcacacca
catgcggcttggcaacaagagctacgtggtcaaattgaggagattaacttaaaagagatg
gtgggtcgtgtcagtgccaatatgatcttaccgtatcctcctggtgtgccacttgtgtta
ccgggtgaaatggtgactgatagttcacgtcctgtgttggatttcttggaaatgctgtgt
gaaatcggcgcgcattacccaggctttgagactgatattcacggtgtttatcgtcagaaa
gatggcagttataccgttaaagtattgaaagaccgataa
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