Vibrio mediterranei: BSZ05_10255
Help
Entry
BSZ05_10255 CDS
T04936
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
vsh
Vibrio mediterranei
Pathway
vsh00730
Thiamine metabolism
vsh01100
Metabolic pathways
vsh01240
Biosynthesis of cofactors
vsh04122
Sulfur relay system
Module
vsh_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vsh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BSZ05_10255
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BSZ05_10255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vsh03016
]
BSZ05_10255
Enzymes [BR:
vsh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
BSZ05_10255
Transfer RNA biogenesis [BR:
vsh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
BSZ05_10255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
ASI90138
LinkDB
All DBs
Position
1:2187513..2188961
Genome browser
AA seq
482 aa
AA seq
DB search
MRFIVKPHPEIFVKSDSVRKRFTRILECNLRIIIQRRTESVAVYNRRDHIEVNASSDEYY
NEVLEILTHTPGIHHVLEVQQSDFEDMHDIYEQVLELNGSRIENKTFVVRAKRRGKHDFT
SIELERYVGGGLNQAVESARVKLSKPDVTVNIEVANDKLNQIIARHKGLGGFPLGTQEDV
LSLISGGFDSGVSSYLHIKRGSKTHYCFFNLGGPAHEIGVKQVAHYLWNKYGSSAKVKFI
SVDFEPVVAEILEKVEDGQMGVILKRMFMRAGGMLAEKFGIEALVTGEALGQVSSQTLTN
LRHIDGVTDTLILRPLINWDKEDIIDLAREIGTEDFAKTMPEYCGVISRKPTVKAVKTKL
EAEEEKFDFGILEQVVRDARMMDIRDIEKESQEQAPEVEQVQAVEEHAIVLDIRSAEEEE
ESPLELDGVEVQHLPFFKLGTKFGDLDQSKTYLLYCDRGVMSRLQALYLQEQGFNNVKVY
RP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgagatttatcgtaaagccccatccagagatttttgtaaaaagcgattcagtgcgtaag
cgctttacaagaatcttagagtgcaacctgcgaattattatccagcgccgtacggaatct
gtagcggtatataaccgtcgtgaccacattgaagtgaatgctagctctgatgaatactac
aacgaggtgttggagatcctaactcacaccccgggtatccatcatgttcttgaggttcag
caatctgattttgaagatatgcacgatatctacgagcaggtgttggaactaaacggcagc
cgtatcgaaaacaaaacttttgttgttcgagctaagcgacgcggcaaacacgacttcacc
tcaatcgagcttgagcgctatgttggcggtggcttgaaccaagctgtcgaaagtgctcgt
gtgaaactgtctaagcctgacgtaacagtaaacatcgaagttgcgaacgataaactgaat
caaatcatcgctcgccataaagggcttggtggtttccctcttggcacacaagaagatgtg
ctgagcttgatttcaggcggctttgattctggtgtgtcaagctatctgcatattaaacgc
ggttctaaaacgcattactgcttcttcaacttaggcggccctgctcacgagattggcgtt
aagcaagttgcgcattacttatggaacaagtacggctcttcagcgaaagtgaaattcatc
tcggtggactttgaaccggttgttgctgaaattcttgaaaaagtagaagacggccaaatg
ggcgttattcttaagcgtatgtttatgcgtgctggtggaatgcttgctgaaaagtttggc
attgaagccttggtaacgggtgaagcactcggccaggtatcaagccaaacgctgactaat
ttacgtcatatcgatggtgtcactgacacattaattcttcgccccctgatcaactgggat
aaagaagacattatcgaccttgctcgtgaaattggtactgaagatttcgctaagaccatg
cctgagtactgcggggtgatttctcgtaagccaactgtgaaggctgtgaaaactaagcta
gaagctgaagaagagaaattcgactttgggattcttgagcaagtcgtgcgtgatgcgcga
atgatggacattcgtgatatcgaaaaagaaagtcaggagcaagcgcctgaagttgagcaa
gttcaagcagttgaagagcacgctatcgttttggatattcgtagtgcagaagaagaggaa
gagagtccgttggaactcgatggcgttgaagttcaacaccttccattctttaagttagga
accaagtttggtgacttagaccagtctaaaacatatctgctgtactgtgatcgcggcgta
atgagtcgtcttcaagccttgtatttgcaagaacaaggttttaacaatgtgaaggtgtat
cgcccttaa
DBGET
integrated database retrieval system
