Vibrio splendidus: LTQ54_08905
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Entry
LTQ54_08905 CDS
T08240
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vsl
Vibrio splendidus
Pathway
vsl00071
Fatty acid degradation
vsl00280
Valine, leucine and isoleucine degradation
vsl00310
Lysine degradation
vsl00362
Benzoate degradation
vsl00380
Tryptophan metabolism
vsl00410
beta-Alanine metabolism
vsl00640
Propanoate metabolism
vsl00650
Butanoate metabolism
vsl00907
Pinene, camphor and geraniol degradation
vsl00930
Caprolactam degradation
vsl01100
Metabolic pathways
vsl01110
Biosynthesis of secondary metabolites
vsl01120
Microbial metabolism in diverse environments
vsl01200
Carbon metabolism
vsl01212
Fatty acid metabolism
Module
vsl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vsl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
LTQ54_08905 (fadB)
00650 Butanoate metabolism
LTQ54_08905 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
LTQ54_08905 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LTQ54_08905 (fadB)
00310 Lysine degradation
LTQ54_08905 (fadB)
00380 Tryptophan metabolism
LTQ54_08905 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
LTQ54_08905 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LTQ54_08905 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LTQ54_08905 (fadB)
00930 Caprolactam degradation
LTQ54_08905 (fadB)
Enzymes [BR:
vsl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
LTQ54_08905 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
LTQ54_08905 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
LTQ54_08905 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
LTQ54_08905 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UOE83136
LinkDB
All DBs
Position
1:complement(1952145..1954316)
Genome browser
AA seq
723 aa
AA seq
DB search
MIYQANTLQVKELQDGIAELSFCAPASVNKLDLATLESLDKALDALNAHAGLRGLILTSN
KDAFIVGADITEFLGLFAKPEAELDEWLRFANSIFSKLEDLPVPTLSMMRGHALGGGCEC
VLATDFRIGDKTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALK
VGLLDAIVETDQLLESAINTVSLAANEKLDWQLRRKQKTSALSLSKLEAMMSFTMAKGLV
AQKAGPHYPAPITSVIAIEEAARSDRDAALDIERKHFVKLAKSEEAKALVGLFLNDQYIK
GLAKQAGKSANKATERAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQASLDLGMNEASKL
LNKRLSRGRLDGFKMAGILSSITPSLHYAGVEQSDVIVEAVVENPKVKAAVLSEVEGLVG
EDTVLTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVA
YAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAY
LLDVVGLDTAHHAQAVMAQGFPERMGKEERDAIDALYVAEKYGQKNGSGFYTYSVDKRGR
PKKTFSEDILPILADVCQQPQDFDDQTIIQRVMIPMINEVVLCLEEGIIATPQEADMALV
YGLGFPPFRGGVFRYLDSVGIGNFVEMAKSYQDLGAMYQVPQLLLDMAAKGESFYDGQQA
SSL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaagctaacaccctacaggtaaaggaattacaagatggtattgcggaatta
agtttctgtgcaccggcatctgtaaacaaactcgaccttgcaactttagaatcactagat
aaagcgttagatgctcttaatgctcacgcaggattacgtggtttaatcttaacttcaaac
aaagacgcgttcattgtgggcgcagacatcactgaatttcttggcctatttgctaagcca
gaagcagaacttgatgaatggttaagattcgctaattcaatcttcagcaagctcgaagac
cttcctgtcccaactctttcaatgatgcgtggccatgcccttggcggcggctgtgaatgt
gtactcgctaccgatttccgtatcggtgacaagaccaccagcataggtctaccagaaacc
aagcttggcatcatgcctggttttggtggttgtgtgcgcctacctcgtgttatcggtgct
gacagcgcgatggaaattatcactcaaggcaaagcatgccgtgcagatgaagcgcttaaa
gttggcttgttagatgcgattgttgaaacagaccaactactagaatcagcgatcaacacg
gtttctttggcagccaatgagaaacttgattggcagctacgccgcaaacaaaaaacatca
gcgctttcactaagtaaactagaagcgatgatgagctttaccatggctaagggcttagtg
gctcaaaaagcagggcctcactacccagctccgattacttctgtgattgcaattgaagaa
gcagcgcgcagcgatcgcgatgcggcgttagacatcgaacgcaaacacttcgttaagcta
gcaaaatctgaagaagcgaaagcccttgtcggtttattcttgaatgaccaatacattaaa
ggcttagcaaaacaagctggtaagtctgcgaataaagcaactgaacgcgcagcagtactt
ggtgctggcatcatgggtggcggtattgcttaccagtcagcattgaaaggcgtgccagtg
atgatgaaagacatcgcacaagcgtctcttgatcttggtatgaacgaagcttctaagctg
ttgaataaacgcttatcacgcggtcgccttgatgggttcaagatggcaggtattctgtct
tctattactccaagtctacattatgcaggtgttgagcaatcagatgtgattgtggaagcg
gttgtagaaaaccctaaagtaaaagcggcagttttgagcgaagtggaaggtttggttggt
gaagacacggttcttacatcaaacacctcaacgattccaatcaacctgttagcgaaatct
ttaaagcgccctgaaaacttctgtggcatgcacttctttaatccagtacaccgcatgcct
ttggttgagatcatccgtggcgagcatacttcagaagaaacaattaatcgcgtagtcgct
tacgcagcgaaaatgggcaaatcccctatcgttgttaatgactgccctggcttcttcgta
aaccgtgtacttttcccttactttggcggtttcagcatgttgttacgcgacggtgctgac
ttcactaagatcgataaagtcatggagcgcaagttcggttggccaatgggccctgcgtac
ctattagacgttgttggtttagacacagcacaccatgcccaagcagtaatggcgcaaggt
ttccctgagcgtatgggtaaagaagagcgtgatgcgattgacgcgctttatgtcgctgaa
aaatacggccagaagaacggcagcggtttctacacatacagcgtagacaagcgcggtcgt
cctaagaagaccttctctgaagacattcttcctatcttggctgacgtatgccaacagcca
caagactttgatgaccagaccattatccaacgtgtgatgattcctatgatcaacgaagtg
gtgctttgtttagaagaaggcatcatcgcgacaccgcaagaagcggatatggcactggtt
tacggtttaggcttccctccattcagaggcggcgtattccgctacttagacagtgtgggt
attggtaacttcgttgaaatggcgaagagctaccaagacttaggtgcaatgtaccaagtt
cctcaactattgcttgatatggcagcgaagggcgaaagcttttacgacggtcaacaagcc
agttctctgtaa
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